Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00293 ATGGCCTCAAGCTCTCAGAGAAAACAAAATTCTCAATCCTCTTGGACATTTAAGCAGAACAAACTGTTTGAAAAGGCACTTGCTATTTATGATAAAGATACCCCAGACCGCTGGCAGAATATAGCCAATGCTGTAGGTGGAAAAACAGCAGACGAAATCAAGAGGCACTATGAGGTCCTCGTAAGGGATCTCATGAACATAGAGTCTGGCCGAATTCCACTCCCCCGGTACAAGTCTACTGGCAATCTCGATAAAGAAGAGAGCTTAAAGCTCGCGTTCTTGCATATCTGGCAGGCTTATGAAGAATCTCAAGCTACAGTGATTCCGGTCTACTTTCTCCTTTCTGTTTTCAGGAAACGTCTATACAAGAAGCTTCAACTGTTTACTCTCATGATCATAAATTAA 405 0.4222 MASSSQRKQNSQSSWTFKQNKLFEKALAIYDKDTPDRWQNIANAVGGKTADEIKRHYEVLVRDLMNIESGRIPLPRYKSTGNLDKEESLKLAFLHIWQAYEESQATVIPVYFLLSVFRKRLYKKLQLFTLMIIN* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00293 134 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Pte2g00293 134 SMART sant 11 63 IPR001005 -
Pte2g00293 134 CDD SANT 14 61 IPR001005 -
Pte2g00293 134 ProSiteProfiles Myb-like domain profile. 7 61 IPR001005 -
Pte2g00293 134 Pfam Myb-like DNA-binding domain 13 58 IPR001005 -
Pte2g00293 134 Gene3D - 6 74 - -
Pte2g00293 134 FunFam Transcription factor SRM1 7 74 - -
Pte2g00293 134 SUPERFAMILY Homeodomain-like 13 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00293 Pte-Chr2 2298411 2299051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g00293 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00293 - - qsa:O6P43_011590 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00293 2 2298411 2299051 Pte2g00293 2 2298411 2299051 RCT