Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00292 ATGAACGGGGAGCTGCAATTACCAGACATGTTGCAATGTATTAATGCCTCTGGAAAAGTGAATATTAGCGGCTGCGATATGTCATTGTTGGAGAGACAGAAGGCAAGAATGAAGTGGCAAAAATATCTAACTTTTCAACGAGAAGGAGGAGGGTATATTTGTAGCACTGCTGGGTTGAATAGAGGGTCGTTCTCTATGCAAGCTCAGGTGGGTCAAGTTCGGAACTTTCAGGGTGTCACGGTAGTTGGTGACTCTGTGTCAGGTGAAGCGGCTGATCGTTCCGTGAAGGCTGACCCTGGATTGGGAAACGGTTGGGCTGAATTGGGCAATTTTGATACGCCTTGTTTGGAATATGGTTCATCCGCTGGTTTGGCACCTGGTGTTACTGCTTCTGAGTTTAACATGAATTCTACTATCGCAAGGACTTTAAGCTGTCCCCCTCCTGTGGCTAACGTAGCAACAGAGACCAGAAGCAGAGAGTCGAGTTTATCAGAGAAGATAAGTTGTCCCTCGGGGAAAGAGAGCTGCAAGAAGAGGAAAGCTGGTAGCAAGGTTCAGAACTCGAAGATTGTTGAAGCAGATGATAAGAAGGACAAGAAGATCAAAGTTTGTGGTGATGAAGAAGAATCAAAGATCACAGAGCAAGCCAGCTCGAAAAGCAACGCAGTGACTAATAACAGCAAAAGGAGCAGCAATGAAAAGAGCAATAGAGAAACTTCTTCAGCTTCAAAAGAAAATTCAAAGGTCTCTGAAGTTCAGAAGCCTGATTATATTCATGTCCGAGCACGTCGTGGGCAAGCAACAGACAGTCACAGTTTAGCTGAAAGAGTTAGAAGGGAAAAAATAAGTGAGAGGATGAAGTATTTGCAAGACATAGTGCCTGGTTGTAATAAAATTACAGGCAAAGCTGGAATGCTAGATGAGATCATCAACTATGTCCAATCTCTTCAAAGACAAGTAGAGTTTCTCTCAATGAAATTGGCTGCTGTAAATCCAAGGCTTGACTTCAACATTGATGATCTTTTTGCCAAAGAGGTTTTTCCTGCTTACGCACCTAGTTTTCCAGCCATGGGGATGGCCGACATGGCTAATCATGCATACCTTCAATTTAATCAAGCACAGCAAATGGCTGCATATTGTGGAATGGAAATGGGGATGACCCCTTCAGATATGAGTCTACGAAGAACAATTAGTGCTCCAGTATCCATACCAGAAACATTTGTTGACTCCTCTTGTTACACCGTAATGTTCTTCAAATCATACTTACCTGTCATCTCTTTCGGTTGGCTGCTAACAGCCAATTTTTCTCACATAAGTTTTGTCCTTGTATCGCAGCAAATGCAGTCTTCCTGGGAAGCCGGTTTATCAACTTCTTATAGTGCAGCTTTTGATCAAGGACACCATCTCAGCCACACATAG 1419 0.4334 MNGELQLPDMLQCINASGKVNISGCDMSLLERQKARMKWQKYLTFQREGGGYICSTAGLNRGSFSMQAQVGQVRNFQGVTVVGDSVSGEAADRSVKADPGLGNGWAELGNFDTPCLEYGSSAGLAPGVTASEFNMNSTIARTLSCPPPVANVATETRSRESSLSEKISCPSGKESCKKRKAGSKVQNSKIVEADDKKDKKIKVCGDEEESKITEQASSKSNAVTNNSKRSSNEKSNRETSSASKENSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDIVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDDLFAKEVFPAYAPSFPAMGMADMANHAYLQFNQAQQMAAYCGMEMGMTPSDMSLRRTISAPVSIPETFVDSSCYTVMFFKSYLPVISFGWLLTANFSHISFVLVSQQMQSSWEAGLSTSYSAAFDQGHHLSHT* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00292 472 SMART finulus 272 322 IPR011598 GO:0046983
Pte2g00292 472 FunFam Basic helix-loop-helix transcription factor 263 335 - -
Pte2g00292 472 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 157 378 IPR024097 GO:0006355
Pte2g00292 472 CDD bHLH_AtBPE_like 256 341 - -
Pte2g00292 472 MobiDBLite consensus disorder prediction 144 169 - -
Pte2g00292 472 Pfam Helix-loop-helix DNA-binding domain 270 317 IPR011598 GO:0046983
Pte2g00292 472 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
Pte2g00292 472 MobiDBLite consensus disorder prediction 144 256 - -
Pte2g00292 472 Gene3D - 263 337 IPR036638 GO:0046983
Pte2g00292 472 MobiDBLite consensus disorder prediction 215 230 - -
Pte2g00292 472 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 335 IPR036638 GO:0046983
Pte2g00292 472 MobiDBLite consensus disorder prediction 189 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00292 Pte-Chr2 2287078 2289696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00292 111 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 45.614 1.76e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g00292 HLH 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00292 - - mnt:21401527 432.565