Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00257 ATGAGGGTATATGAATTTTCGATGTACTGTGGTTTAGGCATGGGAGCTGCTTATGGCACAGCAAAGAGTGGGGTTGGGGTCGCTTCCATGGGTGTGATGAGGCCTGAGTTGGTGATGAAATCTATCGTTCCTGTAGTTATGGCTGGTGTCTTGGGTATTTATGGTCTTATTATTGCTGTGATCATCAGTACTGGCATTAACCCCAAAGCTAAATCATATTATCTTTTCGATGGCTATGCACATCTCTCCTCTGGGCTTGCTTGTGGTCTCGCTGGACTCTCTGCTGGGATGGCCATCGGGATTGTCGGTGATGCTGGTGTTAGAGCTAATGCGCAGCAGCCAAAACTATTTGTTGGGATGATTCTCATCCTTATCTTTGCTGAAGCTCTTGCTCTTTATGGTCTTATTGTTGGCATTATCTTGTCTTCCCGTGCTGGGCAATCGAGAGCTGACTAA 456 0.4627 MRVYEFSMYCGLGMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00257 151 FunFam V-type proton ATPase proteolipid subunit 5 148 - -
Pte2g00257 151 Pfam ATP synthase subunit C 10 62 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pte2g00257 151 Pfam ATP synthase subunit C 83 141 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pte2g00257 151 SUPERFAMILY F1F0 ATP synthase subunit C 73 142 IPR035921 -
Pte2g00257 151 CDD ATP-synt_Vo_c_ATP6C_rpt2 75 142 - -
Pte2g00257 151 CDD ATP-synt_Vo_c_ATP6C_rpt1 14 66 - -
Pte2g00257 151 PRINTS Vacuolar ATP synthase 16kDa subunit signature 120 143 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte2g00257 151 PRINTS Vacuolar ATP synthase 16kDa subunit signature 93 119 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte2g00257 151 PRINTS Vacuolar ATP synthase 16kDa subunit signature 16 40 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte2g00257 151 PRINTS Vacuolar ATP synthase 16kDa subunit signature 42 66 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte2g00257 151 NCBIfam V-type ATPase subunit C 14 107 IPR011555 GO:0033179|GO:0046961|GO:1902600
Pte2g00257 151 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 13 147 - -
Pte2g00257 151 Gene3D - 3 148 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00257 Pte-Chr2 2076355 2079570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00257 12 152 Primary Pumps ATPases(2) AT4G34720 99.291 4.17e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00257 K02155 - zof:121975318 241.121