Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00254 ATGGGTGATACTGAAGAAGCTAATACTGATATGATGCAGAGGCGTCAATCTTCAATCGGAACTTCGTCATCTTCAATTCTAAGACAGCCTTTGACCATGGACCAACTGAATATATCTCAACCGAGCCCTTCACAACTTCGAGCTAGAAATTCTCAGCAAAATTGTAGTGGAGATGGTGGTAAGAGAGCTGGTATACCGCCTTCACATCCTCACCAGATGCCTCCCGTTTCTCCATATTCTCAGATCCCTGTATCAAGGTCGACAAGCCAGCAAATGGGTCCTCATAATTTTAGCCCTGGACCTACTCATTCACGATCATTATCTCAACCATCATTTTTCTCACTTGACACATTGCCTCCCTTGAGCCCTTCACCTTTTCGTGATTCTTTGTCGTCCCCTACGTCGGACACAGCTTCACCCGATGTGTCAATGGAGGATAGGGATGCGAATGCGCAGTCTTTCTTGCCGCCGTCACCCTTTACAAGAACCAATTCTCCAAGGGTTGGTGAAACTTTACCCCCTCGGAAAGCACACAGGCGCTCTAGCAGTGATATACCTTTTGGGTTTTCTACTATGATGCATTCTTCTCCACCATTGATTCCAGCAAGGGCTCCAGGTGGTCTGGAAAGGTCGTTATCTGGCGGAGAAAGTTCACCAATGACTAAACCTGCGCAATTGATTAAAAAGGAATCACCTTGGGACAAACGTACTGATCTAAATGTTGAAGAGACAGGTGAAAGAAAATCCCCTGAAGGAGAAGTTGTGGATGATCTTTTTAGTGCATACATGAATTTGGATAACCTTGAAACACTGAACTCATGTGGGACTGATGACAAGAACGGTCACGTGAATCGTGATGATTTAGATAGTAGAGCTAGTGGAACCAAGACTAATGGTGATAGAAGTGACAATGAAGCTGAGAGTAGTGTGAATGAAAGTGAAGGCAGTGTACCTAGGGTGGGGCTGAATTCTTCATCTGAGAAGAGAGAAGGTACTAAAAGGAGTGCAGGTGGAGATATTGCTCCTACTAATAGACACTATAGGAGTGTTTCTATGGATAGTTTCATGGACAAGTTGAATTTCAGTGATGATTTGCCTAAAATACCACCTTCCCCGGGTTCCGGTCCAGGTCAACTTTCTCCTAACAACTCAATTGATGGCAGTTCATCTGCTTTTAGCTTGGAGTTTGGGAATGGTGAGTTTAGTGGAGCGGAGTTAAAAAAGATTATGACCAATGAAAAGCTTGCTGAAATTGCATTATCTGATCCTAAGCGTGCAAAAAGGATTTTGGCAAACCGTCAATCTGCTGCTCGCTCCAAGGAACGAAAGATGCGTTACATTTCGGAGTTGGAGCACAAAGTTCAGACTCTTCAGACAGAAGCTACCACTCTTTCTGCACAGCTTACCTTGTTACAGAGAGACTCTGTAGGGTTGAACAACCAGAATAATGAATTGAAATTTCGCCTCCAAGCAATGGAACAACAGGCTCAACTCCGAGATGCTCTAAATGAAGCCTTAACAGCTGAAGTTCAACGCTTGAAGCTTGCTACTGCTGACCTAGGTGGTGATTCTCGCCATCCCAAGTGCATGGTTCCGCAGCTTTCTATCAACAGTCAGATGTTCCAGCAGCTGCAGCAGCAGCAGCAGCGGCTACCTTCTACCCAATTGAACATGCACCTCCACCAGCAGCATGAACACCAGCCATCTTCAACGCTGTCTCAGCAGCAGAACGGCAAGGCAATTTCAAACTCCGAGTCAAGTAAATAA 1767 0.451 MGDTEEANTDMMQRRQSSIGTSSSSILRQPLTMDQLNISQPSPSQLRARNSQQNCSGDGGKRAGIPPSHPHQMPPVSPYSQIPVSRSTSQQMGPHNFSPGPTHSRSLSQPSFFSLDTLPPLSPSPFRDSLSSPTSDTASPDVSMEDRDANAQSFLPPSPFTRTNSPRVGETLPPRKAHRRSSSDIPFGFSTMMHSSPPLIPARAPGGLERSLSGGESSPMTKPAQLIKKESPWDKRTDLNVEETGERKSPEGEVVDDLFSAYMNLDNLETLNSCGTDDKNGHVNRDDLDSRASGTKTNGDRSDNEAESSVNESEGSVPRVGLNSSSEKREGTKRSAGGDIAPTNRHYRSVSMDSFMDKLNFSDDLPKIPPSPGSGPGQLSPNNSIDGSSSAFSLEFGNGEFSGAELKKIMTNEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLNNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATADLGGDSRHPKCMVPQLSINSQMFQQLQQQQQRLPSTQLNMHLHQQHEHQPSSTLSQQQNGKAISNSESSK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00254 588 MobiDBLite consensus disorder prediction 154 168 - -
Pte2g00254 588 Coils Coil 440 495 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 279 308 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 558 588 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 361 391 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 11 58 - -
Pte2g00254 588 Pfam bZIP transcription factor 424 481 IPR004827 GO:0003700|GO:0006355
Pte2g00254 588 Gene3D - 423 475 - -
Pte2g00254 588 SMART brlzneu 420 484 IPR004827 GO:0003700|GO:0006355
Pte2g00254 588 MobiDBLite consensus disorder prediction 228 254 - -
Pte2g00254 588 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 99 586 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 377 391 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 1 255 - -
Pte2g00254 588 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 422 485 IPR004827 GO:0003700|GO:0006355
Pte2g00254 588 FunFam probable transcription factor PosF21 423 476 - -
Pte2g00254 588 MobiDBLite consensus disorder prediction 309 325 - -
Pte2g00254 588 SUPERFAMILY Leucine zipper domain 424 475 IPR046347 GO:0003700|GO:0006355
Pte2g00254 588 MobiDBLite consensus disorder prediction 270 345 - -
Pte2g00254 588 CDD bZIP_plant_RF2 425 474 IPR044759 GO:0003700|GO:0006355
Pte2g00254 588 MobiDBLite consensus disorder prediction 78 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00254 Pte-Chr2 2062064 2066305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00254 1 544 bZIP Transcription Factor Family AT4G38900 60.963 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte2g00254 bZIP_1 8.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00254 - - qsa:O6P43_011530 801.971