Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00253 ATGGCTGTTACTGACATTCCTCCCTTGTCATCTTCACTTTCGAAGTCCTCCTTTGGACTTCTGAATACAGCCAATACCCGTGCCCTGCTTCCCGTTAAAACCTTTCAAAACCCCTCCTTTCACCAAAAATCCAATTTTTTTCATGCCTCCTCAACCCTGTCTCCAACTCATAAGGGCTCTTTCACCATCTCTGCGAAGAACCCAATTTCTGAGTTTTTTTCTGAAAATAAATCAAACCTAGATGACAATTATGCAGTCTACTATGATGATGATGATGAAAAGCCCCGTGAGGAGTGTGGTGTTATGGGTATCTATGGGGACCCAGAAGCCTCCCGCCTTTGCTATCTGGCACTACACGCGCTTCAGCATCGTGGTCAAGAAGGAGCTGGGATTGTTTCTGTGCAGAATAACGTTTTGCATTCCATAACTGGAGTTGGGCTTGTCTCCGATGTGTTTAACGAGTCTAAGCTTGACCAATTGCCTGGAGATTTGGCTATTGGGCATGTTAGGTATTCCACAGCTGGTGCTTCCATGCTTAAAAATGTCCAGCCTTTTGTTGCAGGCTACCGTTTTGGCTCAGTTGGGGTTGCCCACAATGGTAACTTGGTTAATTATGGTGCTCTAAGGGCCAAACTTGAAGAGAACGGATCGATTTTTAACACTAGTTCGGACACAGAGGTGGTGCTTCACCTTATCGCGACTTCAAAGCAAAGGCCTTTCCTTCTGAGGATTGTTGATGCTTGCGAGAAGCTTGAGGGGGCTTATTCAATGGTCTTTGTTACTGAGGATAAGCTGGTTGCAGTGAGAGACCCTTTGGGGTTTCGGCCCTTAGTTATGGGGAGGAGGAGCAATGGTGCTATTGTGTTTGCTTCTGAAACTTGTGCTCTTGACTTGATTGAGGCCACATATGAAAGAGAGGTGTACCCGGGTGAGGTTTTGGTTGTGGACAAAAATGGGCTTCAATCACTTTGCCTAATGCCTCATCCACAGCCAAAGCAGTGTATCTTTGAGCATATTTACTTTGCGCTTCCCAATTCAGTAGTTTTTGGAAGATCTGTCTATGAATCTAGGAGAAAATTTGGGGAGATATTGGCTACCGAAGGCCCTGTTGATTGTGATGTTGTGATAGCAGTTCCAGATTCTGGAGTGGTCGCTGCCCTTGGCTATGCTGCAAAAGCTGGGGTGCCTTTTCAGCAGGGGTTGATTAGGTCTCACTATGTTGGTCGGACTTTCATTGAGCCCTCACAAAAAATTAGAGACTTTGGAGTCAAGCTGAAGCTCTCACCTGTGAGAGCAGTATTGGAAGGCAAAAGAGTTGTGGTTGTGGATGACTCAATTGTTAGGGGAACTACATCATCTAAAATAGTTAGGATGATTAAAGAGGCAGGAGCCAAGGAAGTACATATGAGAATTGCGAGCCCACCAATCATTGGCTCTTGTTATTATGGAGTAGACACGCCTAGTTCAGAGGAGTTGATTTCAAATAGGATGAGTGTGGAGGAGATCAGAAACTTCATTGGTTCAGATTCACTTGCTTTCCTGCCATTTGATAGCTTAAAACGATTGTTAAGTGACGATTCTCCTAATTACTGTTACGCTTGCTTTTCTGGGAAGTACCCTGTTGAACCCAGAGAGATTAAAGTGAAGAGAGTTGGTGATTTTGTGGACGATGGATTGAATGGCAGTCCAGAATTCATCGATGGGGGTTGGGTTCAAGCCAACAGAACTCCAAAAGAGGTGGTTGGAAATGTGTAA 1755 0.4484 MAVTDIPPLSSSLSKSSFGLLNTANTRALLPVKTFQNPSFHQKSNFFHASSTLSPTHKGSFTISAKNPISEFFSENKSNLDDNYAVYYDDDDEKPREECGVMGIYGDPEASRLCYLALHALQHRGQEGAGIVSVQNNVLHSITGVGLVSDVFNESKLDQLPGDLAIGHVRYSTAGASMLKNVQPFVAGYRFGSVGVAHNGNLVNYGALRAKLEENGSIFNTSSDTEVVLHLIATSKQRPFLLRIVDACEKLEGAYSMVFVTEDKLVAVRDPLGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVYPGEVLVVDKNGLQSLCLMPHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATEGPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRMIKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRNFIGSDSLAFLPFDSLKRLLSDDSPNYCYACFSGKYPVEPREIKVKRVGDFVDDGLNGSPEFIDGGWVQANRTPKEVVGNV* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00253 584 Hamap Amidophosphoribosyltransferase [purF]. 98 539 IPR005854 GO:0004044|GO:0009113
Pte2g00253 584 Pfam Phosphoribosyl transferase domain 357 468 IPR000836 -
Pte2g00253 584 CDD PRTases_typeI 361 472 IPR000836 -
Pte2g00253 584 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 97 546 - -
Pte2g00253 584 SUPERFAMILY PRTase-like 334 545 IPR029057 -
Pte2g00253 584 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 99 540 IPR029055 -
Pte2g00253 584 NCBIfam amidophosphoribosyltransferase 99 540 IPR005854 GO:0004044|GO:0009113
Pte2g00253 584 Gene3D - 358 522 IPR029057 -
Pte2g00253 584 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 99 322 IPR029055 -
Pte2g00253 584 Pfam Glutamine amidotransferase domain 179 296 IPR017932 -
Pte2g00253 584 CDD GPATase_N 99 349 IPR035584 -
Pte2g00253 584 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 99 318 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00253 Pte-Chr2 2057703 2060316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00253 89 572 PRT Gene Family AT2G16570 85.597 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00253 K00764 - qsu:111995724 949.118