Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00250 ATGGCGATTAAGAAGTCAAGCAAACTCGCTCAAACCGCAATGCTAAAGCAAATTCTTAAAAGATGTTCAAGCCTAGGAAAGAAGCATGGATATGATGATGATGGCCTTCCCTTAGATGTGCCAAAGGGCCATTTTCCTGTCTATGTGGGGGAAAACAGAAGTAGGTACATTGTGCCTATCTCATTTTTGACTCATCCTGAGTTTCAATCTCTCCTTCAACGAGCAGAAGAAGAATTTGGCTTTGATCACGACATGGGCCTGACAATTCCTTGTGAAGAAGTTGTTTTCCGCTCTCTGACATCAATGCTCCGATGA 315 0.4286 MAIKKSSKLAQTAMLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00250 104 Pfam Auxin responsive protein 24 103 IPR003676 GO:0009733
Pte2g00250 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00250 Pte-Chr2 2039205 2040024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00250 37 99 Calmodulin-binding Proteins AT3G43120 55.556 1.89e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00250 K14488 - pop:7477848 202.216