Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00249 ATGTTTCATTTTCGGGCCATTCGAAGGGCTTCGTTTGCTAGAAACCAGGGGGAAATCTCAAAGCATGCTAATGTGCCTAAGGGATACCTTGCAGTTTATGTTGGTGAAAGGCAAAAGAGGTTTCTGATTCCCATATCATACTTGAGCCAACCTTCATTTCAAAACTTATTGAATCAAGCTGAAGAAGAATTCGGGTATGATCATCCAAAGGGGGGCCTAACAATACCTTGCGGTGAAGATGTTTTTCTAGATATCACTTCTCGCTTGAATGAATTGTGA 279 0.4122 MFHFRAIRRASFARNQGEISKHANVPKGYLAVYVGERQKRFLIPISYLSQPSFQNLLNQAEEEFGYDHPKGGLTIPCGEDVFLDITSRLNEL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00249 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 89 IPR003676 GO:0009733
Pte2g00249 92 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00249 Pte-Chr2 2018055 2018333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00249 24 82 Calmodulin-binding Proteins AT3G43120 57.627 1.64e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00249 K14488 - gmx:100787155 135.576