Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte2g00248 | ATGGCTATTGGCTTGGTTGGGCTCATGCATGCTAAGGAAATCATTTGTCGTTCTCTTTTGAAGGGCATAGGAGCAACCCGATCATCAATTGTGCCAAAAGGTCACTTCACAGTCTATGTTGGTGAGAATCAAAAGAAACGATTTGTGGTGCCAATCTCATACCTGAATGAGCCTGCCTTCCAAGAATTGTTGAGCAAGGCCGAGGAAGAATTTGGATATGATCATCCCATGGGCGGGGTCACAATCCCTTGTAGGGAAGATATCTTTCTTAACCTAACTTCTCGTTTAGAACCATAA | 297 | 0.4377 | MAIGLVGLMHAKEIICRSLLKGIGATRSSIVPKGHFTVYVGENQKKRFVVPISYLNEPAFQELLSKAEEEFGYDHPMGGVTIPCREDIFLNLTSRLEP* | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte2g00248 | 98 | Pfam | Auxin responsive protein | 25 | 95 | IPR003676 | GO:0009733 | |
| Pte2g00248 | 98 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED | 28 | 96 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte2g00248 | Pte-Chr2 | 2014524 | 2020983 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte2g00248 | 31 | 97 | Calmodulin-binding Proteins | AT5G20810 | 49.254 | 5.21e-14 | 62.4 |