Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00247 ATGGGTTTTCATTTTCGGACCATTCGAAGGGCTTCGTTTGCTAGAAACCAGGGGGAGAGCTCAAAGCATGCCTATGTGCCTAAGGGACACCTTGCAGTTTATGTTGGTGAAAGGCAAAAGAGGTTTTTGATTCCCATATCATACTTGAGCCAACCTTCATTTCAAGACTTATTGAATCAAGCTGAAGAAGAATTTGGGTATGATCATCCAATGGGGGGCCTAACAATACCTTGCGGTGATGATGTCTTTCTAGAAATCATTTCTCGCTTGAATGAATTGTGA 282 0.422 MGFHFRTIRRASFARNQGESSKHAYVPKGHLAVYVGERQKRFLIPISYLSQPSFQDLLNQAEEEFGYDHPMGGLTIPCGDDVFLEIISRLNEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00247 93 Pfam Auxin responsive protein 10 90 IPR003676 GO:0009733
Pte2g00247 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00247 Pte-Chr2 2011825 2013013 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00247 26 83 Calmodulin-binding Proteins AT3G43120 56.897 6.10e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00247 K14488 - gmx:106794448 137.502