Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00246 ATGAGAATGGGCAACGGATTCATGGGAATAGCTCAAGCTAAGCAAAAGCTCCAGAGAACTCTTTCAGCAAGAATCAAAATGCTTTCAGCTACTGCTCATGATGTTCCAAAAGGCCACTTTGCTGTTTACGTAGGAGAAAGCCACAAAAGGTTTGTGATTCCAATATCTTACTTGAACCACCCTTTGTTCCGAGAACTATTGCATTGGGCTGAAGAAGAATTTGGGTTTGATCATCCAATGGGAGGTCTCACCATTCCATGCACAGAGGATTACTTTATTAGTCTCACTTCATCGATCTCTTAA 303 0.4158 MRMGNGFMGIAQAKQKLQRTLSARIKMLSATAHDVPKGHFAVYVGESHKRFVIPISYLNHPLFRELLHWAEEEFGFDHPMGGLTIPCTEDYFISLTSSIS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00246 100 Pfam Auxin responsive protein 22 98 IPR003676 GO:0009733
Pte2g00246 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 26 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00246 Pte-Chr2 2008867 2009492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00246 33 92 Calmodulin-binding Proteins AT5G20810 63.333 3.95e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00246 K14488 - gmx:100781277 171.014