Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00242 ATGTCTAGCACGGCTGGTCAAGTTATCAAGTGCAAAGCGGCCGTGGCATGGGAGGCAGGCAAGCCGCTGGTAATTGAGGAAGTGGAAGTGGCCCCACCACAGAAGAATGAAGTGCGTGTCAAGATCCTCTTTACCTCTCTATGCCACACTGATGTCTACTTCTGGGAAGCAAAGGGGCAAAATCCTGTTTTTCCTCGCATTTTGGGTCATGAGGCCGGAGGGATTGTGGAGAGTGTAGGTGAAGGAGTGACTGATGTCCAACCAGGAGATCATGTTTTGCCCGTTTTCACTGGGGAATGCAAGGAATGCAGGCACTGCAAGTCAGAGGAGAGCAACATGTGTGATCTACTCAGGATCAACACTGATAGGGGTGTGATGATTCATGACGAAAAGTCAAGATTCTCCAAAAATGGACAGCCTATCTACCACTTTGTCGGTACTTCCACATTTAGTGAATACACGGTTGTTCATGTCGGGTGTCTTGCAAAGATCAATCCTGCTGCCCCACTTGATAAAGTTTGTGTCCTCAGTTGCGGCTTCTCAACAGGTTTTGGTGCCACTGTGAATGTTGCCAAGCCGAAAAAGGGCTCTTCTGTTGCCATTTTTGGACTGGGAGCTGTTGGTCTAGCTGCTGCCGAAGGAGCAAGGGTCTCTGGTGCATCACGAATTATCGGGATTGATTTGAACCCCAATCGGTTTGAAGAAGCTAAGAAGTTCGGCGTAAACGAGTTTGTGAATCCAAAAGACTATGACAAACCTGTTCAGCAGGTAATTGCAGAGATGACTGATGGTGGTGTGGATCGAGCTGTTGAATGCACTGGAAGCATCCAGGCTATGATCTCTGCTTTTGAATGCGTCCATGATGGTTGGGGTGTAGCTGTACTTGTTGGAGTGCCAAGCAAAGACGATGCGTTCAAAACTCATCCCATGAATTTCTTGAATGAAAGGACTCTCAAGGGAACCTTCTATGGAAACTACAAACCTCGCACTGACATTCCTAATGTTGTGGAGAAGTACATGAACAAGGAGATGGAGTTGGATAAGTTCATCACTCACACAGTTCCATTCTCAGAGATCAATACAGCATTCGACTTGATGCTGCAAGGGAAGTCAATTCGATGCATCATCCGTATGGAGTAG 1140 0.4719 MSSTAGQVIKCKAAVAWEAGKPLVIEEVEVAPPQKNEVRVKILFTSLCHTDVYFWEAKGQNPVFPRILGHEAGGIVESVGEGVTDVQPGDHVLPVFTGECKECRHCKSEESNMCDLLRINTDRGVMIHDEKSRFSKNGQPIYHFVGTSTFSEYTVVHVGCLAKINPAAPLDKVCVLSCGFSTGFGATVNVAKPKKGSSVAIFGLGAVGLAAAEGARVSGASRIIGIDLNPNRFEEAKKFGVNEFVNPKDYDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDIPNVVEKYMNKEMELDKFITHTVPFSEINTAFDLMLQGKSIRCIIRME* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00242 379 Gene3D - 19 370 - -
Pte2g00242 379 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Pte2g00242 379 Gene3D - 183 321 - -
Pte2g00242 379 CDD alcohol_DH_plants 9 377 - -
Pte2g00242 379 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Pte2g00242 379 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Pte2g00242 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Pte2g00242 379 SUPERFAMILY GroES-like 328 377 IPR011032 -
Pte2g00242 379 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Pte2g00242 379 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Pte2g00242 379 SUPERFAMILY GroES-like 4 186 IPR011032 -
Pte2g00242 379 FunFam Alcohol dehydrogenase class-P 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00242 Pte-Chr2 1977144 1980147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00242 1 327 Monolignol Biosynthesis Gene Families AT1G72680 25.228 1.64e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00242 K18857 - zju:107421623 711.449