Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00225 ATGCTTGGTTTCTTCCTCCAAGCTTATGTTACTGGAGAAGGTCCCGTTGAGAACCTTGCAAAACATCTTAGTGACCCTTTTGGCAACAACTTGCTGACAGTCATTGGTGGCGCTGGGGTTGAAACGGCATCGTATTACTTTAGGAACCCTGGGATAAATGATTTTATTATATTCCGAAATCCAACACAGATTCGTCATGGGCGGCTCTATGTCAATGGCGTTCCAAAGAAAGAAGATTTTATAGCACAGCAGCCAACATATTCTACTAAATTGACATTGACTTTTAACGTTCCTCTCAATACCATGCTGGCTCGTCTGTACCAGCATCTCATGTATACGTGTGAGGGGGCAACTGGAATAACAGCTATGACTCCCATGTTTGAAACCATCTTCCAAACTCTAGGAAGGCATGTTTGCATTTTCTCTAGCTACCTATTTGCTACTCTACAAAGAAATGCTAAGAAGATTCCTATTGATATTTGTGTACCGTCCAATGCCAGCGTTAGCATTATAGACCAGGGACGACGTGGGAACCCCTGCTTTTTAAAGTACATGTACATGGTAGAAGTAGGACATACCCTGACGTAG 588 0.4286 MLGFFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIGGAGVETASYYFRNPGINDFIIFRNPTQIRHGRLYVNGVPKKEDFIAQQPTYSTKLTLTFNVPLNTMLARLYQHLMYTCEGATGITAMTPMFETIFQTLGRHVCIFSSYLFATLQRNAKKIPIDICVPSNASVSIIDQGRRGNPCFLKYMYMVEVGHTLT* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00225 195 SUPERFAMILY Chlorophyll a-b binding protein 1 35 - -
Pte2g00225 195 Gene3D Chlorophyll a/b binding protein domain 1 45 - -
Pte2g00225 195 SUPERFAMILY LexA/Signal peptidase 44 125 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00225 Pte-Chr2 1861804 1866127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00225 1 37 Chloroplast and Mitochondria Gene Families AT4G10340 94.595 3.41e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00225 K08916 - osa:4350176 78.9517