Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00222 ATGGCGGCAGCAGATTTACAATTACCTCCTGGCTTCAGATTTCATCCTACCGATGAGGAGCTTGTGTTACACTACCTCTGCCGGAAATGTGCCTCCCAATCCATTCCCGTGCCGATCATTGCTGAAATTGAACTTGGCAAGTTTGATCCCTGGGACCTTCCAGGTCTGGCTTTGTATGGAGAGAAAGAATGGTTTTTTTTCTCTCCCAGGGACCGAAAATACCCTAAGGGGTCACGGCCAAACCGTGCTGCGGGATCCGGTTACTGGAAAGCAACCGGAGCTGATAAACCCATTGGGAAACCGAAACCAGTGGGGATCAAGAAAGCTTTGGTGTTTTACTCGGGAAAAGCACCAAAAGGAGAGAAAACCAACTGGATCATGCACGAGTATCGGTTGGCCGATATCGACCGCTCTGCTCGGAAGAAGAACATCTTAAGGCTGGACGATTGGGTGCTATGTCGTATTTACAACAAGAAGGGCAGTATCGAGAAACGACCACAAGGACTTGTCAAGAAGACACAGCCTACGGAGATGAAGGAGCAAAAGCCGTTAACTCTGAAGCGCGAAGAAGTACTATCACAACCTGCTCTGGCTCTGGCGCCGTCAATTAAGGCTAATGATTGCTTTCACTTCGATTCGTCAGATTCGATTTCGAAGCTGCATACGGATTCAAGCTGCACCGAGCAGGTAGTGTCGCCTGAGTTTGCAAGCGAGGTGCAGAGCGAGCCCAAGTGGAATGAGTGGAGCAAGAACGACCCAGGTTTTGTGTATAATTACTTGGATGCCAATCTAGGAAACGACTTAACAGCACAGTTCATTGGAAACCAGATGTCTCCGTTACAGGACATTTTCATGTATTTGCAGAAGCCGTTCTGA 876 0.4852 MAAADLQLPPGFRFHPTDEELVLHYLCRKCASQSIPVPIIAEIELGKFDPWDLPGLALYGEKEWFFFSPRDRKYPKGSRPNRAAGSGYWKATGADKPIGKPKPVGIKKALVFYSGKAPKGEKTNWIMHEYRLADIDRSARKKNILRLDDWVLCRIYNKKGSIEKRPQGLVKKTQPTEMKEQKPLTLKREEVLSQPALALAPSIKANDCFHFDSSDSISKLHTDSSCTEQVVSPEFASEVQSEPKWNEWSKNDPGFVYNYLDANLGNDLTAQFIGNQMSPLQDIFMYLQKPF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00222 291 PANTHER NAC TRANSCRIPTION FACTOR 56 8 213 - -
Pte2g00222 291 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Pte2g00222 291 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Pte2g00222 291 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Pte2g00222 291 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Pte2g00222 291 FunFam NAC transcription factor 17 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00222 Pte-Chr2 1837638 1839099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00222 6 292 NAC Transcription Factor Family AT1G01720 69.360 1.93e-142 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g00222 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00222 - - pop:7466451 419.468