Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00216 ATGGAAGGTCTAACTCAACCAAACCAAAATCCTAAACTTTGGGAAGAAGATAACGACGAGGAGACTGGCAAATTAGCCCTCCGGATAGCCATCAATGTTAGCCTTCCCATGGTCTTAAAATCAGTGATAGAGCTCAACATCTTTGAGATCATAGCAGAAGCTGGAGCCAATGCGTTTCTCTCACCTGTTGGCATTGCAGCTAAGCTCACCACTAAGAATCCTGACGCCCCTATTTTGCTAGACCGGATGCTCAGTCTCTTAGCGAGCCATTCTATACTTAAGTGCTCCGTCCAGACAGGACAAGATGGTGAAGTTCTGAGATCGTATGGACTGGGACCTATTTCGAAGTTCTATCTGAAGAATCAAGGAGAAGGCTCTTTTGGCCCTTTGCTACTTCTGCTCCAAGATAAGATTTTCATGCAGAGCTGGTACCACTTGAATGATGCAGTACTAGAAGGAGGTGTTCCTTTTGATAGGGCATATGGCATGAATGCATTTGAATATCCAGGGAAGGATCAAAGATTCAACCAGGTGTTTAACCAGGCCATGTCAAACCACACCACGTCAATAATGAAGAAGATACTTGATGTGTACAGTGGATTGGAAGAGGTTAAAATATTGGTAGATGTAGGTGGTGGCATTGGAGTCAATCTCAACATCATTACTTCGAAGTATCCCCACATCAAAGGCATCAATTATGACTTGCCTCATGTGGTTATGGATGCTCCACCTCATTCAGGCGTGGAGCATGTAGGTGGAGATATGTTTGAGTGTGTTCCACAAGGAGATGCCATTTTCATGAAGTGGATACTCCATGACTGGAGTGACAATCACTGCTTGAAGCTGCTCAAGAATTGCTATGAAGCTCTCCCAGACAATGGAAAGGTAATCATAGTGGAGTCAATTATTCCCGAGACCCCAGAAAACAATGTTGCTGCTAATATTGTCTACTTGCAAGATATTTTCATGCTAGCTCAAAATCCTGGAGGGAAAGAAAGGACTCAGAAGGAGTTCAATGCACTGGCCATGAAATCTGGATTTGCAAGCTGTGAAGTCATATGTAGTGCTTATAGTTTCTGGGTAATGGAATTTCACAAGAAGTAG 1104 0.4339 MEGLTQPNQNPKLWEEDNDEETGKLALRIAINVSLPMVLKSVIELNIFEIIAEAGANAFLSPVGIAAKLTTKNPDAPILLDRMLSLLASHSILKCSVQTGQDGEVLRSYGLGPISKFYLKNQGEGSFGPLLLLLQDKIFMQSWYHLNDAVLEGGVPFDRAYGMNAFEYPGKDQRFNQVFNQAMSNHTTSIMKKILDVYSGLEEVKILVDVGGGIGVNLNIITSKYPHIKGINYDLPHVVMDAPPHSGVEHVGGDMFECVPQGDAIFMKWILHDWSDNHCLKLLKNCYEALPDNGKVIIVESIIPETPENNVAANIVYLQDIFMLAQNPGGKERTQKEFNALAMKSGFASCEVICSAYSFWVMEFHKK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00216 367 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
Pte2g00216 367 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Pte2g00216 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 364 IPR029063 -
Pte2g00216 367 PANTHER O-METHYLTRANSFERASE 30 351 IPR016461 GO:0008168
Pte2g00216 367 Gene3D Vaccinia Virus protein VP39 119 366 IPR029063 -
Pte2g00216 367 Pfam O-methyltransferase domain 143 347 IPR001077 GO:0008171
Pte2g00216 367 FunFam Caffeic acid O-methyltransferase 119 366 - -
Pte2g00216 367 Gene3D - 5 118 IPR036388 -
Pte2g00216 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 366 IPR016461 GO:0008168
Pte2g00216 367 FunFam Caffeic acid 3-O-methyltransferase 6 118 - -
Pte2g00216 367 PIRSF O-mtase 5 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00216 Pte-Chr2 1768019 1770117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00216 18 367 Monolignol Biosynthesis Gene Families AT5G54160 56.857 7.34e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00216 K13066 - qsu:111986891 530.791