Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00211 ATGCTAAACCCAAAATTCATAATCTGCAATGCTGTACCCTTGTTTCTTTGGATTACTGTAGCCAATGTAATTCTTGTAAACTCGAAGTCCACTATTGAACCTTGTTCAAACTCAGATTCCTGCAATGCTCTTCTTGGATACAAGCTATATACTGACCTTAAAGTAGCAGAGGTTGCTTCCCTCTTCCAAGTTGACCCCGTTGCCATTCTCACTGCTAATGCTATTGACATTTCATACCCTGACGTTGAAAATCATATCCTTCCTTCTCAACTCTTCTTGAAAATTCCCATATCCTGCGCTTGTGTAGATGGGATTCGCAAATCTGTGTCAACGCAATACAAAACTCGCCCCTCTGACACTCTCTCGTCTATTGCTGACTCTATATATGGGGGTTTGGTTTCTGCTGATCAGATTAGGGAGGCTAATTCTATAACAGATCCATCAGTGCTCGATGTTGGTCAGAACCTTTTAGTTCCTCTTCCTTGTACTTGCTTCAATGGGACTGATAATGGACTGCCTGCAATATACTTGTCATACGTGGTGCAGCCAATTGATACCTTGGCTGCTATTTCTTCGAGGTATTCGACCACCCTTACTGATTTGATGAATGTTAATGCTATGGGAAGTACAGCAATCAAAGATGGCGATATACTCGCTGTACCTATACCGGCTTGTGCATCAAGATTTCCAAGATCTGCCTCAGACTTTAACTTGATTGTTCCTAATGGGAGTTACGCCATTACAGCAAGTCACTGTGTGCAATGCAGTTGTGGCCCTGGGAATCTCAACTTGTATTGCATGCCTGCATCATTGGCCGTTTCTTGTTCTACTATGCAATGCAGAAACAGCAACTTAATGCTTGGGAATGTCACGGCACAACAAAATAGCGGTGGATGTAATGTGACATCATGTATTTATGATGGTTATGCTAATGGAACAATAATGGCAACGTTGTCATCGTCTCTTCAACCTCGATGCCCTGGTATGATATAA 993 0.422 MLNPKFIICNAVPLFLWITVANVILVNSKSTIEPCSNSDSCNALLGYKLYTDLKVAEVASLFQVDPVAILTANAIDISYPDVENHILPSQLFLKIPISCACVDGIRKSVSTQYKTRPSDTLSSIADSIYGGLVSADQIREANSITDPSVLDVGQNLLVPLPCTCFNGTDNGLPAIYLSYVVQPIDTLAAISSRYSTTLTDLMNVNAMGSTAIKDGDILAVPIPACASRFPRSASDFNLIVPNGSYAITASHCVQCSCGPGNLNLYCMPASLAVSCSTMQCRNSNLMLGNVTAQQNSGGCNVTSCIYDGYANGTIMATLSSSLQPRCPGMI* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00211 330 Gene3D LysM domain 173 228 IPR036779 -
Pte2g00211 330 SUPERFAMILY LysM domain 177 222 IPR036779 -
Pte2g00211 330 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 13 328 - -
Pte2g00211 330 CDD LysM 178 220 IPR018392 -
Pte2g00211 330 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Pte2g00211 330 SUPERFAMILY LysM domain 112 160 IPR036779 -
Pte2g00211 330 Pfam LysM domain 113 159 IPR018392 -
Pte2g00211 330 Pfam LysM domain 179 221 IPR018392 -
Pte2g00211 330 Gene3D LysM domain 107 167 IPR036779 -
Pte2g00211 330 CDD LysM 111 158 IPR018392 -
Pte2g00211 330 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Pte2g00211 330 SMART LysM_2 112 159 IPR018392 -
Pte2g00211 330 SMART LysM_2 178 221 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00211 Pte-Chr2 1736126 1739441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00211 13 328 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 73.994 1.48e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00211 - - qsa:O6P43_019748 553.132