Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00201 ATGAGGAATCGTCAAACACAAAGGAAACCGAGTGCGAACGAAAACAGGAAAAGTGAGCAACCGCAGAAACTTGAGAAATACCATTCTTGGGCTGTTGTAAGAAGTTTATGGACTTGTAGAAATCAACAACCGCAGCAGCAGGTACAGCAACTGTCAACACCAGGTCAAGCAAAGCAGCAGCTAGCGCAGAGGAAGCTACCACAGGAGCATGTGGTAGAAGAAGGCAGAAAGGTATGCAAGAAAATGAGGTGTTCCGGTTCACTGTGTAACAACACAAAAGTCATGCACAGACCAGAATTACCACCCACTGATATTCACAGAAAAAGGAACTCGTTTGGTTCTGATAACTCCAGGAATGCTTCAAGTAGATCCATGAAAGGTCCTTTACATGAGCTCAATGGGGATGTCTCTGCCTCTACTTGTTCAATCTCTGCTTCTTCTCATTCTTCTTCTGCAGGCTCTTTCAGAAGCATGCCCTTCAGCAGATTCTCTGGCTGTTATGAATGTCGAATGGTGGTGGACCCTGTTCTTGGTTTCACACGAGACCCTTCTCTACGGACCAGCATTTCTTCGTGTCCTGAATGTGGTGAGATCTTCATGAAAGCTGAAAATCTGGAACTTCATCAAGCTGTTCGACATGCTGTGTCTGAAATGGGTCCGGAAGATACAAGCAAGAACATTGTGGAAATTATATTTCATTCAAGCTGGCTAAAGAAAGAAACCCCAGTATGCAAAATTGAGCGGATCCTTAAAGTTCAGAACACCCAGAAGACCATAGGAAAATTCGAAGAATACAGAGATTTAATCAAAGCCAAAGCTACAAGGCTCCCAAAGAAGCATCCGCGTTGCATAGCAGATGGTAATGAGCTCCTCAGGTTTCACTGTAGCACCCTTATCTGCTCACTAGGCCTGAACGGTTCCTCCAACCTCTGTAATTCCATCCCACAATGCAATGTCTGCAGCATAATCAAGAGTGGATTCAGGGTTGTCGGGGAACAACATGAAGGGACTGTGGGGAAGGGGATACTGACTACCGCAACAAGCGGTAGAGCACATGACAGCGCTGGAATTACAACAGAAGAAAAGAGCAATAGCAAAAGAGCTATGTTGGTTTGCCGAGTAATCGCAGGCAGAGTTAAGAAGAACTCAGAAGGAAGTATGGAAGAGTATGACTCAATTGCAGGGGCCGCTGGGGCGTACTCCAATTTGAATGAGTTCATGAGTCATCTGTTTTCGTATTTGGAGTGGTAG 1251 0.4524 MRNRQTQRKPSANENRKSEQPQKLEKYHSWAVVRSLWTCRNQQPQQQVQQLSTPGQAKQQLAQRKLPQEHVVEEGRKVCKKMRCSGSLCNNTKVMHRPELPPTDIHRKRNSFGSDNSRNASSRSMKGPLHELNGDVSASTCSISASSHSSSAGSFRSMPFSRFSGCYECRMVVDPVLGFTRDPSLRTSISSCPECGEIFMKAENLELHQAVRHAVSEMGPEDTSKNIVEIIFHSSWLKKETPVCKIERILKVQNTQKTIGKFEEYRDLIKAKATRLPKKHPRCIADGNELLRFHCSTLICSLGLNGSSNLCNSIPQCNVCSIIKSGFRVVGEQHEGTVGKGILTTATSGRAHDSAGITTEEKSNSKRAMLVCRVIAGRVKKNSEGSMEEYDSIAGAAGAYSNLNEFMSHLFSYLEW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00201 416 MobiDBLite consensus disorder prediction 95 131 - -
Pte2g00201 416 SUPERFAMILY ADP-ribosylation 216 407 - -
Pte2g00201 416 MobiDBLite consensus disorder prediction 99 113 - -
Pte2g00201 416 ProSitePatterns Zinc finger C2H2 type domain signature. 192 213 IPR013087 -
Pte2g00201 416 MobiDBLite consensus disorder prediction 7 24 - -
Pte2g00201 416 Gene3D - 214 408 - -
Pte2g00201 416 MobiDBLite consensus disorder prediction 1 25 - -
Pte2g00201 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 79 404 - -
Pte2g00201 416 ProSiteProfiles Zinc finger C2H2 type domain profile. 190 218 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00201 Pte-Chr2 1661428 1663557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00201 155 409 C2H2 Transcription Factor Family AT1G75710 50.000 4.49e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte2g00201 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00201 - - qsa:O6P43_015222 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00201 2 1661428 1663557 Pte2g00201 2 1661428 1663557 RCT