Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00197 ATGAATCACATACATAGATTCCTTGTTCCTAGCAAGCGAGCCAAGGACATGGATCGCAAGAACAAGCCAAGGACGCCGAAGCTTGATCGCCGTAATGCAGTGAAGCACATTGAGTACGACGCAGCTTCGTCTTCTTCGTCCTTGGACGACTCCTCCGGTTCTCTCTACACTCGCTCGCTAGATATTCCCGATCGTACTAGCTTCCGGATCGAAGGAACGGAAGGTGAGTTCGACCGGATTTGCCAGAGGTTGGGTCTTTCCGGACCGGAAGATTTTGCTATTCCGGCTGCTGATTGGGAAGCTATGAAGTTAAGATCTTCTTCTGATATTCTACCCGTCACCAAAGCCCTAGACGAGATCGATGCTTCAAAGCAAGCTGAACTGAAGATGAAGAGCATGAACGATCCGGTGGTTGAAGTGATGAATGGGTTTGAGGAAAGGGTTTCAATTATACCTACCGATGAGCCGGCTGAGACTAGTGGGTGTTGTGTTTCTAATTCTGGTGTTTGTGTGGCTAGCGTTGGAGTTGGAATCAAAGGAATTCGTCCACCTTTTCTCAAGCCACCGCCGTTGATGAGACTTCCGGTCATTGATAATTCCGGCTCGACTTGGGACCTCGTGAAAGATCTAGCTCCGCAAGTTGAGTCTCGTTCTTTGGAAGAGAAGGATGAAGAAACTGGAAAACGAGGAAACAAGGACAATTGTCACAAGGTAGAAGAGACAGTAGTGGTAATAAGGGCAATTGATGACACGGCACTATCGAAGAGAGAAGAGGATGATACTGTAGGAAGAGTGGAGGGGAATGTCGTTCTTTCAGAGTCTTATTCTTTTACTACAACATCCAATGATGATGATGATTCTAGCACTACTACCGAGCCCCTTTCGACTATTTCTCCAAACGGGAGATTTAGGCGCGTTATTACGGATTGGCAAAAGGGTGAGCTTTTAGGACGTGGATCGTTTGGATCAGTTTATGAAGGGATTTCTGATGATGGATTCTTTTTTGCGGTGAAGGAAGTGTCTCTGCTTGATCAAGGGAGTCAAGGGAGGCAAAGTATATCTCAACTAGAGCATGAGATTGCACTCCTAAGCCTGTTTGAGCATGAGAATATAGTTCAATACTATGGAACTGACACGGTAACAGCCCTCTCACTCTTTCACACTCACAAACACAGCACAACAAAATACAGAGTTTTATGTTCATGGCCTGGTGGTTGTATATCAAATTTTTATTGTGCCAGTGGATGA 1248 0.4575 MNHIHRFLVPSKRAKDMDRKNKPRTPKLDRRNAVKHIEYDAASSSSSLDDSSGSLYTRSLDIPDRTSFRIEGTEGEFDRICQRLGLSGPEDFAIPAADWEAMKLRSSSDILPVTKALDEIDASKQAELKMKSMNDPVVEVMNGFEERVSIIPTDEPAETSGCCVSNSGVCVASVGVGIKGIRPPFLKPPPLMRLPVIDNSGSTWDLVKDLAPQVESRSLEEKDEETGKRGNKDNCHKVEETVVVIRAIDDTALSKREEDDTVGRVEGNVVLSESYSFTTTSNDDDDSSTTTEPLSTISPNGRFRRVITDWQKGELLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQGRQSISQLEHEIALLSLFEHENIVQYYGTDTVTALSLFHTHKHSTTKYRVLCSWPGGCISNFYCASG* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00197 415 MobiDBLite consensus disorder prediction 39 54 - -
Pte2g00197 415 MobiDBLite consensus disorder prediction 214 233 - -
Pte2g00197 415 ProSiteProfiles Protein kinase domain profile. 310 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00197 415 MobiDBLite consensus disorder prediction 9 37 - -
Pte2g00197 415 Gene3D Phosphorylase Kinase; domain 1 295 387 - -
Pte2g00197 415 MobiDBLite consensus disorder prediction 9 54 - -
Pte2g00197 415 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Pte2g00197 415 Pfam Protein kinase domain 311 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00197 415 MobiDBLite consensus disorder prediction 276 295 - -
Pte2g00197 415 SUPERFAMILY Protein kinase-like (PK-like) 288 380 IPR011009 -
Pte2g00197 415 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 68 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00197 Pte-Chr2 1603374 1609265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00197 4 377 MAP Kinase Kinase Kinase AT4G08500 40.941 1.20e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte2g00197 Pkinase 6.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00197 K13414 - qsa:O6P43_019713 414.846