Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00187 ATGACGTCTCCAAATAGAGATCAAGAGCAACAGTTCCCTCATCTGGCAAGACAAGCCTCTCTATGTAACCTCACTTTTGATGAGGTGCAGAGCCAACTGGGAAACACAGGTAAACCCTTGTACAACATGAGTTTGGATGAATTGCTGAGACATGTGATTTCAGCTGATAGTGACCAATTAATACAAAACCTTTCAGCCTCATCACCTGCTTCACACTTTCCGGGGAATATAAATTTGAACCGAACATGGAGTAAGAAAACAGTGGACGAGGTATGGAAAGAAATAGCTAATCGTGGACAACTGAACACAATGGAGAATCATATGGTACAGCAACATGTGAATTTAGGTGAAACAACACTCGACGAGTTTTTAATTCGTGCTGGTCTAACGAGCATAGGGAACCAAGACAGTAGTCAGGTTGATGGTCGACCAATAATGGGACTAGATCCAAAAGTTGTGCCACAACAGACAGCTTGGTTACCGTTGCAGATGACAGTTTATCAACAGCAGCAGAATATTACAGGGGTGAACTCAGATTATAATGTTTCGGAGTCAGTGTATGATCAGTGTTCAGCTTTGGATATGGCGTACTCAGCAAATCAGTTGGCTATGTCCATGCCCATGGCAACAGCGTCATCAGCATCTTCAGATTGTAAAGCCACAAATGAAAGGAAGCGTCAGCACTCAGAAGAGATAATGGAGAAGAATATGGAAAGGAGGCAGAGGAGAATGATCAAGAACCGGGAATCAGCTGCCAGGTCAAGAGCTAAGAAGCAGGCTTATACAAATCAGTTGGAGCATAAAGTATCTCGCTTGCGGAAGATAAACAATTGGCTCAAAAAGCAGAAGGAGGTGGAGGAACTCCTATCTTCAAATCCAACTCCCACACAGAAACGCCAACTACGGCGTACGAGTTCGGCAAACCTGTAG 930 0.4387 MTSPNRDQEQQFPHLARQASLCNLTFDEVQSQLGNTGKPLYNMSLDELLRHVISADSDQLIQNLSASSPASHFPGNINLNRTWSKKTVDEVWKEIANRGQLNTMENHMVQQHVNLGETTLDEFLIRAGLTSIGNQDSSQVDGRPIMGLDPKVVPQQTAWLPLQMTVYQQQQNITGVNSDYNVSESVYDQCSALDMAYSANQLAMSMPMATASSASSDCKATNERKRQHSEEIMEKNMERRQRRMIKNRESAARSRAKKQAYTNQLEHKVSRLRKINNWLKKQKEVEELLSSNPTPTQKRQLRRTSSANL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00187 309 Gene3D - 237 292 - -
Pte2g00187 309 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 306 IPR043452 GO:0003700|GO:0045893
Pte2g00187 309 CDD bZIP_plant_BZIP46 239 295 - -
Pte2g00187 309 SMART brlzneu 235 307 IPR004827 GO:0003700|GO:0006355
Pte2g00187 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 282 IPR004827 GO:0003700|GO:0006355
Pte2g00187 309 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Pte2g00187 309 MobiDBLite consensus disorder prediction 288 309 - -
Pte2g00187 309 Pfam bZIP transcription factor 239 282 IPR004827 GO:0003700|GO:0006355
Pte2g00187 309 MobiDBLite consensus disorder prediction 286 309 - -
Pte2g00187 309 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 237 289 - -
Pte2g00187 309 MobiDBLite consensus disorder prediction 219 265 - -
Pte2g00187 309 MobiDBLite consensus disorder prediction 213 265 - -
Pte2g00187 309 SUPERFAMILY Leucine zipper domain 239 284 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00187 Pte-Chr2 1550235 1551840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00187 15 310 bZIP Transcription Factor Family AT3G56850 40.850 8.80e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte2g00187 bZIP_1 1.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00187 K14432 - qsa:O6P43_019692 363.614