Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00179 ATGGCAGCTGCAATGGATTTCTTCACTGGTAGACCAGTTCAGTCAGATCCAATGAGAGGTGAGTTACTAGAAGTACTTGAACCTTTTATGAAAAGCTCTTTCACAACTCCCTGTCCCTCTATTTCATTAACATCATCTCCTTCCTCAACCATCAGTAGTTCTTTACCTTCAACCTCCTGTTCTCCTTCTTCCAACGCCTACTTCTACTCATCTCTTCCCTCCCAGTCCAATTACTACGCGACAGGTTGCTCCACTTCGATGAACCCGGTTATTTCAGAAGGGTTCTCGAATAGCCAACACCTAATTGGCTTTGAGCAACCTAGTTCAGTCATTGGTCTGGATAACCTTACCCTATCTCCGATCATGCATAGCCAAGCTCATATCCAGCTTCAGAACCAACAAATTTCCTGGCAAAAACAAAACCAATATGACCCACAATCACGTAGCCTTAACTTTCTCAGTCCTAAACCCGTGCCCATGAAGCACATAGGGGTGCCTCCCAAACCCGCCAAACTCTACAGGGGAGTCAGGCAACGCCATTGGGGCAAATGGGTAGCAGAGATTAGACTACCAAAGAATCGTACCCGTCTTTGGCTTGGTACTTTTGACTCTGCTGAAGAAGCTGCTCTGGCATATGACAAGGCCGCTTACAAGCTCAGAGGGCGGTCCAAGCTGGTTTATGAGGCGGTAGCAGAGGCTCAGCCGCAGGTGGTGACAAGTTCTCCGGAAGATAACTCGGTGGTTACTGAAGTTGAACCTAATTGTTCTGCTAATTTCTACAAGGTGGAGGTTTCCTCGTCGCCGGTGACAGCCGAGAGCGATGGTTCTGAAGGGTCTTCACCTCTGTCAGGTCTCACTTTTCCAGATGTCACCGAATTTCATTGGGACGACGCTTCTGATAATTTCATGTTGGCGAAGTACCCTTCGTACGAGATAGACTGGGCTTCATTGTGA 954 0.4769 MAAAMDFFTGRPVQSDPMRGELLEVLEPFMKSSFTTPCPSISLTSSPSSTISSSLPSTSCSPSSNAYFYSSLPSQSNYYATGCSTSMNPVISEGFSNSQHLIGFEQPSSVIGLDNLTLSPIMHSQAHIQLQNQQISWQKQNQYDPQSRSLNFLSPKPVPMKHIGVPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDSAEEAALAYDKAAYKLRGRSKLVYEAVAEAQPQVVTSSPEDNSVVTEVEPNCSANFYKVEVSSSPVTAESDGSEGSSPLSGLTFPDVTEFHWDDASDNFMLAKYPSYEIDWASL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00179 317 CDD AP2 171 223 IPR001471 GO:0003700|GO:0006355
Pte2g00179 317 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 317 - -
Pte2g00179 317 SUPERFAMILY DNA-binding domain 172 223 IPR016177 GO:0003677
Pte2g00179 317 ProSiteProfiles AP2/ERF domain profile. 172 229 IPR001471 GO:0003700|GO:0006355
Pte2g00179 317 FunFam Ethylene-responsive transcription factor 2 171 227 - -
Pte2g00179 317 PRINTS Ethylene responsive element binding protein signature 195 211 IPR001471 GO:0003700|GO:0006355
Pte2g00179 317 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Pte2g00179 317 Pfam AP2 domain 173 221 IPR001471 GO:0003700|GO:0006355
Pte2g00179 317 Gene3D AP2/ERF domain 172 228 IPR036955 GO:0003700|GO:0006355
Pte2g00179 317 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00179 Pte-Chr2 1494237 1495687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00179 1 317 AP2-EREBP Transcription Factor Family AT1G78080 38.043 7.19e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g00179 AP2 2.2e-14 CL0081