Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00178 ATGACAAATCAAAATGTGGTGGTTCCTGACGTGAAGTCACGTATTGGAATGGCTATTGCGGCGGCCATTTCCAACTCCTCTTTTTTATCCGGTCCTGCTGTACCAGAATCATTGGCTACGCTAGGTGGGTTACTAGGCATATCTCAGAAGCAGCTCATCAGAAGGCTTGATTATGGAGGAGGTAGGGGATCAGGGGCCAAAGTTTGTGCTTGGGTTGATTCCATGAGATCTTCCTCACCAACACGAAACAAACCCACCTCTGGAACTAATGATAATAGTTCCTGGAACTTTGATCACCCTTCAGCTTTGTGTAAGTTTGAAGAGTTGACAAACCAGATGAAAGGGAAGCAGATTCTAATGTTCCTGGATTATGATGGAACCTTGTCTCCAATAGTTTGTGACCCCGACAGAGCATTCATGACCAAGAAGATGAGATCAGCTGTGAAGGACATAGCAAAGCATTTCCCCACGGCCATAGTGAGTGGGAGGTCCAAGGACAAGGTCTTCAACTTTGTTAAACTGACAGAGCTCTACTATGCCGGTAGCCATGGAATGGATATCCAAGGTCCAACCAAGAGCCAGAATCACAATAAAGGTAATCAAAGACTCCTCTTCCAACCAGCCGGCGAATTCTTAACTTTGATGAATGAGGTGTATAAAGTCTTGTTGGAGAGGACAAAGTCTGTTCCTGGTGCTTTAGTGGAGAATAACAAGTTTTGTTTGTCTGTGCACTTCAGATGTGTTGATGAAAAGAGTTGGGCATCATTGGCTGAGCTAGTTCGATCAGTTCTCAACCAATATCCCAAGCTAAGGTTGACCCAAGGGAGAAAGGTACTTGAGATTCGTCCAACTATCAAATGGGACAAAGGGAAAGCCCTGGAATTCTTGTTGGAGTCACTTGGATATGCAAATTGTAAGGATGTGTTCCCAATCTACATTGGTGATGATCAAACTGACGAGGACGCATTTGAGGTATTAGGTAATAGAGGTCAAGGGTGTGGGATCCTTGTTTCCAAAGTTCCAAAAGAAACCAAGGCGTCATACACTTTGCAGGACCCATCAGAGGTTGAGCAGTTTTTGCGGCGTCTGGTGGAGTGGAAACGATTTTGA 1110 0.4477 MTNQNVVVPDVKSRIGMAIAAAISNSSFLSGPAVPESLATLGGLLGISQKQLIRRLDYGGGRGSGAKVCAWVDSMRSSSPTRNKPTSGTNDNSSWNFDHPSALCKFEELTNQMKGKQILMFLDYDGTLSPIVCDPDRAFMTKKMRSAVKDIAKHFPTAIVSGRSKDKVFNFVKLTELYYAGSHGMDIQGPTKSQNHNKGNQRLLFQPAGEFLTLMNEVYKVLLERTKSVPGALVENNKFCLSVHFRCVDEKSWASLAELVRSVLNQYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYANCKDVFPIYIGDDQTDEDAFEVLGNRGQGCGILVSKVPKETKASYTLQDPSEVEQFLRRLVEWKRF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00178 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 57 368 IPR044651 GO:0004805|GO:0005992
Pte2g00178 369 NCBIfam HAD-IIB family hydrolase 119 329 IPR006379 -
Pte2g00178 369 CDD HAD_TPP 119 356 - -
Pte2g00178 369 Gene3D - 118 202 IPR023214 -
Pte2g00178 369 Gene3D - 213 368 IPR023214 -
Pte2g00178 369 SUPERFAMILY HAD-like 119 366 IPR036412 -
Pte2g00178 369 FunFam Trehalose 6-phosphate phosphatase 214 369 - -
Pte2g00178 369 NCBIfam trehalose-phosphatase 115 364 IPR003337 GO:0003824|GO:0005992
Pte2g00178 369 FunFam Trehalose 6-phosphate phosphatase 208 284 - -
Pte2g00178 369 FunFam Trehalose 6-phosphate phosphatase 118 204 - -
Pte2g00178 369 Pfam Trehalose-phosphatase 121 354 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00178 Pte-Chr2 1484022 1486600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00178 109 365 Trehalose Biosynthesis Gene Families AT1G06410 26.007 1.58e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00178 K01087 - qsa:O6P43_015290 562.762