LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g00172	ATGGTGGAAGCAATGAAGAAGGTTGCTCAATTGGATGTGGAGCTGACCGTGGAGGGGAGGAATCTGGTATCTATTGGGTACAAAAATGCCATTGGCGCAAGGAGAGCATCATCGAGGATAATGTCTTCAATTGAACAGAAGGAAGAAGCTAAGGGTAATGAACAGAATGTGAAGCATATAAAGGACAACAGTCAAAGCGTTGAATATCTTATCCGTCGTCGACAAGCGTCTCATTCCGTCTTCCTCAACTGGGGAATCTACTGTATTCTATTACAAAATGTAACCCCCTTGTGTTACATTATTCTTAAATGA	312	0.4199	MVEAMKKVAQLDVELTVEGRNLVSIGYKNAIGARRASSRIMSSIEQKEEAKGNEQNVKHIKDNSQSVEYLIRRRQASHSVFLNWGIYCILLQNVTPLCYIILK*	104

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g00172	103	Gene3D	-	1	79	IPR036815	-
	Pte2g00172	103	Pfam	14-3-3 protein	1	71	IPR023410	-
	Pte2g00172	103	PANTHER	14-3-3 PROTEIN	1	70	IPR000308	-
	Pte2g00172	103	SUPERFAMILY	14-3-3 protein	1	71	IPR036815	-

Showing 1 to 4 of 4 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g00172	Pte-Chr2	1417902	1418463	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g00172	1	68	14-3-3 family	AT1G22300	77.941	5.06e-30	105

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g00172	K06630		-	pop:7486596	104.375

Showing 1 to 1 of 1 entries