Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00158 ATGTTAGAAAGACTAGACCAAGAAGATGCATGTGGAGAAACCAGCGTGATAGCAGAGAAGAAACGACGACTTAGCTTGGATCAAGTCAAGGCTTTAGAGAGGAATTTTGAGTTGGAAAACAAGTTAGAGCCAGGACGCAAGTTGAAACTGGCTCAAGAATTAGGCCTGCAACCTCGACAGATCGCCATTTGGTTCCAAAACCGTCGAGCTAGATACAAGACCAAGCTATTGGAACGAGAGTATGGTCTCTTGAAAGCTAATTACGATGCATTGAAGCTCAGTTATGTTAATCTTGAGCATGAAAGGAAAACCTTCTCATTGCAGGTGTTTACTTTCGTTTCATAA 345 0.4203 MLERLDQEDACGETSVIAEKKRRLSLDQVKALERNFELENKLEPGRKLKLAQELGLQPRQIAIWFQNRRARYKTKLLEREYGLLKANYDALKLSYVNLEHERKTFSLQVFTFVS* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00158 114 ProSitePatterns 'Homeobox' domain signature. 50 73 IPR017970 GO:0000981|GO:0006355
Pte2g00158 114 Gene3D - 13 81 - -
Pte2g00158 114 FunFam homeobox-leucine zipper protein ATHB-6-like 23 69 - -
Pte2g00158 114 Pfam Homeodomain 20 73 IPR001356 GO:0003677
Pte2g00158 114 SUPERFAMILY Homeodomain-like 20 86 IPR009057 -
Pte2g00158 114 SMART HOX_1 18 79 IPR001356 GO:0003677
Pte2g00158 114 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Pte2g00158 114 CDD homeodomain 20 75 IPR001356 GO:0003677
Pte2g00158 114 Pfam Homeobox associated leucine zipper 75 104 IPR003106 GO:0006355|GO:0043565
Pte2g00158 114 PRINTS Lambda-repressor HTH signature 46 55 IPR000047 GO:0003677
Pte2g00158 114 PRINTS Lambda-repressor HTH signature 55 71 IPR000047 GO:0003677
Pte2g00158 114 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 13 108 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00158 Pte-Chr2 1321944 1322288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00158 14 109 Homeobox Transcription Factor Family AT5G65310 65.625 5.05e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte2g00158 Homeodomain 3.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00158 K09338 - qsa:O6P43_019612 161.384