Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00150 ATGGGCATAGGTTGCAACAAGCAGAAGGTGAGAGAACCACGGGATTGCAATATTCAAGGCTGTGAACAAGATTACATGGATGAGTTGGCATGGCCTCCAAGATCATATACTTGTAGTTTCTGTATGAGGGAATTCAGATCTGCTCAGGCCCTTGGTGGCCATATGAATGTGCATAGAAGGGACAGAGCTAGACTTAGGCAGTCGTCACCACCACCACCACAGGCAAGAAATAATCATCACTGCCCTTTGCAAAACCACAACCCTAACCCTAACTTTTCATCTTCATCTGCATCCTTTTTGCCAACATTTCCCCCAAGGAACCACAAATCTCTCCCATCCGCATTGCCTAGATTAGTTTCTCAACCTTTCTCCCCTTCATCCAGGCTATCTTCTCCTTCTTCTTCTCCTCCTATTGAAATGCAAAAATGGGTTAAGGCTGATGCCATTGGACTGCATCGATTCAATGCCCAAATCCCAGAGACAACCTTTAATGAGGATAAAAAACTCTTTGCTTTTACTTCAGAAGAAAGGAGCAAGATCTTGAAGAAGACCGAGATTATTAGGTTAGACTTGGAGATTGGGTTGTTTGATGATTCCAAGGAAGATTTGGATCTTGAACTTCGACTGGGTATCTCTTAG 639 0.4366 MGIGCNKQKVREPRDCNIQGCEQDYMDELAWPPRSYTCSFCMREFRSAQALGGHMNVHRRDRARLRQSSPPPPQARNNHHCPLQNHNPNPNFSSSSASFLPTFPPRNHKSLPSALPRLVSQPFSPSSRLSSPSSSPPIEMQKWVKADAIGLHRFNAQIPETTFNEDKKLFAFTSEERSKILKKTEIIRLDLEIGLFDDSKEDLDLELRLGIS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00150 212 Pfam C2H2-type zinc finger 36 60 - -
Pte2g00150 212 MobiDBLite consensus disorder prediction 70 103 - -
Pte2g00150 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Pte2g00150 212 PANTHER OS07G0101800 PROTEIN 28 210 - -
Pte2g00150 212 MobiDBLite consensus disorder prediction 53 137 - -
Pte2g00150 212 Gene3D Classic Zinc Finger 32 86 - -
Pte2g00150 212 SUPERFAMILY beta-beta-alpha zinc fingers 33 62 IPR036236 -
Pte2g00150 212 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Pte2g00150 212 MobiDBLite consensus disorder prediction 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00150 Pte-Chr2 1249988 1250626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00150 17 213 C2H2 Transcription Factor Family AT3G23130 36.726 3.35e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00150 - - qsu:112024893 155.221