Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00149 ATGGAAGCAGATATGCAAGAAAGCTCAGAGAATCTAAGTGACGAAAATGACCAATCAGAAGTCAATGACGACTTGAGCACTAAACGCTCTTATCAATGCGCGTTTTGCCGAAGGGGTTTCACAAATGCTCAAGCTTTAGGAGGGCACATGAACATTCATAGGAAAGACAGAGCCAAAGAGAAGCATATCTCAATTAATTCTGCACTTGCTAACAAATCCTACGAGGATAACTTCTCTACCAGATACATGGCTGATGAACAAACGAAGTACTACTCAGTCTTTGAGGCTCAGACGAATTACTACCACACTTATTATCAGCCATCACCGTCAAACCCTAGATACCCTCCAGTTTCTTATTCATTTGAACATAATTTTCTTGCAGCTACAAGGACACATGGACAACCTCTGAATCAAGAACTACTGGGTGCAAACTTGAGCCTTGGAATGGGTCATTATCATCATGTGGATGAAAATCAGATGAGGGTTGGAGTTAAGAGTGATGGGGAGGTGGATCTGGAGCTTCGTCTTGGATACCATCAGTATTAA 546 0.4194 MEADMQESSENLSDENDQSEVNDDLSTKRSYQCAFCRRGFTNAQALGGHMNIHRKDRAKEKHISINSALANKSYEDNFSTRYMADEQTKYYSVFEAQTNYYHTYYQPSPSNPRYPPVSYSFEHNFLAATRTHGQPLNQELLGANLSLGMGHYHHVDENQMRVGVKSDGEVDLELRLGYHQY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00149 181 PANTHER OS07G0101800 PROTEIN 5 179 - -
Pte2g00149 181 MobiDBLite consensus disorder prediction 1 20 - -
Pte2g00149 181 SUPERFAMILY beta-beta-alpha zinc fingers 28 58 IPR036236 -
Pte2g00149 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Pte2g00149 181 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Pte2g00149 181 MobiDBLite consensus disorder prediction 1 25 - -
Pte2g00149 181 Gene3D Classic Zinc Finger 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00149 Pte-Chr2 1237706 1238353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00149 21 177 C2H2 Transcription Factor Family AT3G09290 35.032 1.13e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte2g00149 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00149 - - tcc:18603159 160.614