Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00148 ATGTTAAGAACATTAGGAATTGGGTTTCTGGTTTTAGCACTCCCCATTTGTGCGTGCGCAAATGATAGTGGATATGCAAGATGTAATTGTGATGATGAAGGAAGCTCCTGGACATTGGAGACCATTGTTGAGGGACAAAAAGTAAGTGATTTCATGATTGCTGTGGCTTACTTCTCGATTCCCATCGAGCTGCTTTACTTTGTTAGCTGCTCTAACGTCCCCTTCAAATGGGTCCTTTTTGAGTTCATCGCTTTTATCGTTTTGTGTGGAATGACTCATCTGCTCAACGGATGGACTTATGGGCCACATTCCTTTCAACTTATGATGGCACTTACTGTCTTCAAATTTCTCACTGCCTTGGTGTCATGTGCTACTGCTATTACCCTCTTAACTCTGATACCTTTGCTTCTCAAAGTGAAGGTCAGGGAATTTATGCTCAAGAAGAAGACCTGGGACCTTGGACGGGAGGTTGGCATGATAATGAAAAAGCAGGAAGCTTCATTGCATGTGAGAATGCTTACACAGGAGATTCGTAAGTCGCTTGACAGGCATACGATTTTGTATACTACTTTGGTTGAGTTGTCTAAAACTTTGGGATTGCAGAACTGTGCAGTCTGGATGCCAAATGAGTACAGGACCGAAATGAGCCTAACCCATGAATTAAATGGGAGGAATTATAAGCATACCATACCTACCACTGACCCAGATGTCAAAAGAATCAAGGGGAGTGATTCTGTAAATATTATTAAGCACGATTCACCAATTGCTGCTGCCAGTACCAGAGAATCTGGTGAGCCAGGACCAGTGGCTGCAATTAGAATGCCAATACTTCGTGTTTGCAATTTTAAGGGGGGAACACCTGAACTAATTCAAGCATGTTATGCAATATTGATTTTGATTCTTCCTGGTGGACATCCAAGAACTTGGAGCTCTCAGGAGCTGGAGATAATCAAAGTTGTCGCTGATCAGGTAGCTGTGGCCCTTTCTCATGCTGCAATTCTTGAAGAGTCACAGTTCATGAGAGAGAAATTGGAGGAGCAAAATCGGACTTTACAACAGGCAAAATTAAATGCTATGATGGCTAGTCAGGCCAGAAACTCATTTCAAAAGGCCATGAGTGATGGAATGAGGAGGCCAATGCACTCGATTATGGGGCTGGTTTCAATAATGCAAGTTGACAATTTAAATTCTGAGCAGAGAGTCATTGTGGATGCAATGTTAAGGACAAGCTCTGTTCTGTCAACCTTGATAAATGATGCCATGGACAGCTCAATAAAAGATGATGGAAGATTCCCTCTGGAGATGCACTCTTTCAGTTTACATTCTATCATAAAAGAAGCAGCTTACCTTTCCAAATGCTTGTGTGTTTATAAGGGTTTGGGTTTTGCTATTGAGGTCGAGAAACACTTGCCTGATAATGTAATGGGTGATGAACGAAGGGTTTTTCAGGTGATTTTGCATATGGTAGGGAATCTACTAGAAAGTAACCATGGGGTTGGGACTGTTGTGCTTAAGGTCCTTTCAGATAGAGGAAGTCAGGATAAAAATGAACATAGATGGACTGCCCGGAAACAGGGTTTCCCTGATGGCAATATTTGTGTAAGATTTCAATTGGAGATGGACTCTAATAGTGCCAAACTGGATTCTGGATTTGGCGGAGGACAGCTTGGGAGTGGGTTCTATGCCTATGACAGAGTGGAAGGAGGTTTGAGCTTCAGCGTTTGCAAAAGAATAGTACAGTTGATGCAAGGGAACATGTGGGCAACATACAACCCTGAAGGTTTTCCAAAAAGCATGACTGTTGTGCTTAGGTTTCAATCTCGATCATCCATAACTATAGCCATTCCAGTACCTGAAGAATCATCAGAACGTTCAGATTCTAACTCTCTCTTCAGAGGCTTACTAGTCCTATTAGCCGATTATGATGGTATGAATAGGGCCGTTACTCAGAAGTTGCTTGAGAAGCTAGGTTGCCATGTTACTTGTGTTGCTTCTGGAGTAGAATGTCTCACAGTCATTAGTGGAGCCGGTTCTACCATCCAAGTTGTTCTTTTGGATCTTCATATGCCTGAGTTAGACAGCTACGATGTTGCCTCGAGGATCAGGAAGTTCCGAAGCCGAAGGACTCCGGTCATACTTGCTCTCACGTCAAATGCTGATGAAGATGTGTGGGAAAGATGCATGGATGGAGTGATCCGGAAACCAGTTCAGTTACAAGGAATAGCAATTGAACTTCGACGAGTCCTGGTGCAGAGTTATAAATTTCAGCGAGGAAGGGATTCATATTAA 2289 0.4277 MLRTLGIGFLVLALPICACANDSGYARCNCDDEGSSWTLETIVEGQKVSDFMIAVAYFSIPIELLYFVSCSNVPFKWVLFEFIAFIVLCGMTHLLNGWTYGPHSFQLMMALTVFKFLTALVSCATAITLLTLIPLLLKVKVREFMLKKKTWDLGREVGMIMKKQEASLHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNEYRTEMSLTHELNGRNYKHTIPTTDPDVKRIKGSDSVNIIKHDSPIAAASTRESGEPGPVAAIRMPILRVCNFKGGTPELIQACYAILILILPGGHPRTWSSQELEIIKVVADQVAVALSHAAILEESQFMREKLEEQNRTLQQAKLNAMMASQARNSFQKAMSDGMRRPMHSIMGLVSIMQVDNLNSEQRVIVDAMLRTSSVLSTLINDAMDSSIKDDGRFPLEMHSFSLHSIIKEAAYLSKCLCVYKGLGFAIEVEKHLPDNVMGDERRVFQVILHMVGNLLESNHGVGTVVLKVLSDRGSQDKNEHRWTARKQGFPDGNICVRFQLEMDSNSAKLDSGFGGGQLGSGFYAYDRVEGGLSFSVCKRIVQLMQGNMWATYNPEGFPKSMTVVLRFQSRSSITIAIPVPEESSERSDSNSLFRGLLVLLADYDGMNRAVTQKLLEKLGCHVTCVASGVECLTVISGAGSTIQVVLLDLHMPELDSYDVASRIRKFRSRRTPVILALTSNADEDVWERCMDGVIRKPVQLQGIAIELRRVLVQSYKFQRGRDSY* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00148 762 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Pte2g00148 762 Gene3D - 428 609 IPR036890 -
Pte2g00148 762 SMART REC_2 634 749 IPR001789 GO:0000160
Pte2g00148 762 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 429 IPR036097 GO:0000155|GO:0007165
Pte2g00148 762 PIRSF Ethylen_sen_hybr_HK 1 756 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Pte2g00148 762 SUPERFAMILY GAF domain-like 185 331 - -
Pte2g00148 762 Gene3D - 620 756 - -
Pte2g00148 762 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 752 - -
Pte2g00148 762 SMART gaf_1 182 338 IPR003018 GO:0005515
Pte2g00148 762 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Pte2g00148 762 ProSiteProfiles Response regulatory domain profile. 635 749 IPR001789 GO:0000160
Pte2g00148 762 Coils Coil 334 364 - -
Pte2g00148 762 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 593 IPR036890 -
Pte2g00148 762 Pfam GAF domain 182 328 IPR003018 GO:0005515
Pte2g00148 762 CDD HATPase_ETR2_ERS2-EIN4-like 470 603 - -
Pte2g00148 762 FunFam Ethylene receptor 4 331 425 - -
Pte2g00148 762 Gene3D - 330 426 - -
Pte2g00148 762 ProSiteProfiles Histidine kinase domain profile. 371 619 IPR005467 -
Pte2g00148 762 SUPERFAMILY CheY-like 631 749 IPR011006 -
Pte2g00148 762 Gene3D - 161 329 IPR029016 -
Pte2g00148 762 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 605 IPR003594 -
Pte2g00148 762 Pfam Response regulator receiver domain 636 739 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00148 Pte-Chr2 1208580 1212844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00148 20 749 Miscellaneous Gene Families AT3G04580 53.949 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte2g00148 GAF 2.3e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00148 K14509 - qsa:O6P43_021454 1083.94