Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00139 ATGAGTGGCGTTGGAGGACGTGGTTTTTCTGGTTCGTCGTCAAGAAGAGGAAAGACTACAGACGAGAAAGAAGGATCGTCATCAGGAGATGTCAAATACAGAGGAGTACGTAGGCGGCCGTGGGGAAAATATGCTGCAGAAATTCGAGACTCAACGAGGCACGGTGCAAGAGTGTGGCTTGGAACTTTTGACACTGCTGAAGAAGCAGCCCGGGCATATGACAGAGCTGCTTACAACATGAGAGGCCAACTGGCAATCCTTAATTTCCCAGATGAATACCCTTTGACCAGTACTGGTCATTCTACTTCTCATTCATGGCGTGATATGGAGAGTGCGGGTCCGAATTCGAAACAAGTGTTTGAAATAGAGTACTTTGATGATAGCTTGCTGGATGAACTTCTTGATGTTGAAGGGAACAAGAGAAAATGA 429 0.4639 MSGVGGRGFSGSSSRRGKTTDEKEGSSSGDVKYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFDTAEEAARAYDRAAYNMRGQLAILNFPDEYPLTSTGHSTSHSWRDMESAGPNSKQVFEIEYFDDSLLDELLDVEGNKRK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00139 142 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Pte2g00139 142 MobiDBLite consensus disorder prediction 1 15 - -
Pte2g00139 142 MobiDBLite consensus disorder prediction 16 34 - -
Pte2g00139 142 CDD AP2 32 91 IPR001471 GO:0003700|GO:0006355
Pte2g00139 142 MobiDBLite consensus disorder prediction 1 34 - -
Pte2g00139 142 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
Pte2g00139 142 SUPERFAMILY DNA-binding domain 32 92 IPR016177 GO:0003677
Pte2g00139 142 PANTHER DNA-BINDING DOMAIN 19 107 IPR044808 GO:0003700|GO:0009873
Pte2g00139 142 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Pte2g00139 142 FunFam Ethylene-responsive transcription factor 2 32 91 - -
Pte2g00139 142 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Pte2g00139 142 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Pte2g00139 142 ProSiteProfiles AP2/ERF domain profile. 32 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00139 Pte-Chr2 1144891 1145879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00139 31 141 AP2-EREBP Transcription Factor Family AT3G23230 57.377 1.73e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte2g00139 AP2 4.8e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00139 - - zju:125423498 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00139 2 1144891 1145879 Pte2g00139 2 1144891 1145879 RCT