Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00131 ATGGTGAGAGCTCCTTGCTGTGAAAAGATGGGATTGAAGAAAGGTCCATGGACCATAGAAGAAGATCAAATCTTGATAGCTTATATCAACAAAAATGGCCATGGCAATTGGCGTGCTCTCCCAAAGCTAGCAGGCCTATTAAGATGTGGGAAGAGCTGCAGACTGCGCTGGATTAATTACTTGAGGCCTGATATCAAAAGAGGAAACTTCACTAGAGAAGAAGAGGACACTATCATTATGCTGCATGAGAAGATGGGGAATAGGTGGTCTGCAATTGCATCACAATTACCAGGAAGGACTGACAATGAAATAAAGAATGTTTGGCATACCCACTTGAAGAAGAGGCTCACGCACAGCCAACCCAATTCGTCAGGTACCAAGAAACACCGCAGAAGCTGTACCATAAGTCAATGTGACTCCATTTCCAGTGTCACCATGCAATCTGAGCTTAGCAACAACAACTTTGGTACAAACCGAGAGTTGGAAAGCTCTGCATGCACGACATCAAATTCCAGTGACTCATCATCATCATCATCATCAGGTGCAGATTTGTCAAGCAACAATGCAGACAGTGAGAATAAGGATAGGGTCAAATTGGAAAACATGGAAGACTCCCTAGAGACAGTTTTACCTGTGATTGATGACACTTTTTGGTCAGAAGCATCATTGAATCTTGAGGATTCCTCTGTGCCTTCGCCAAATTTTACTTCATTCCCGGCTAATGAACTTATGCACGGTCTGTTTTCATTTGATTCACTCAAATCAATGGGGCAGGAAAACATTTTTGGTGCAGACAGTGATAATCATGGAATGGATTTTTGGTACGACTTGTTTGTTACAGCAGGAGAACCATTAGACATGTTCGAAAAATTCTAG 876 0.4235 MVRAPCCEKMGLKKGPWTIEEDQILIAYINKNGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIIMLHEKMGNRWSAIASQLPGRTDNEIKNVWHTHLKKRLTHSQPNSSGTKKHRRSCTISQCDSISSVTMQSELSNNNFGTNRELESSACTTSNSSDSSSSSSSGADLSSNNADSENKDRVKLENMEDSLETVLPVIDDTFWSEASLNLEDSSVPSPNFTSFPANELMHGLFSFDSLKSMGQENIFGADSDNHGMDFWYDLFVTAGEPLDMFEKF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00131 291 CDD SANT 69 112 IPR001005 -
Pte2g00131 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte2g00131 291 Gene3D - 11 67 - -
Pte2g00131 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 221 - -
Pte2g00131 291 CDD SANT 16 61 IPR001005 -
Pte2g00131 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte2g00131 291 MobiDBLite consensus disorder prediction 151 198 - -
Pte2g00131 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte2g00131 291 MobiDBLite consensus disorder prediction 151 188 - -
Pte2g00131 291 Gene3D - 68 137 - -
Pte2g00131 291 FunFam Myb transcription factor 11 67 - -
Pte2g00131 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte2g00131 291 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pte2g00131 291 FunFam MYB transcription factor 68 141 - -
Pte2g00131 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte2g00131 291 SMART sant 13 63 IPR001005 -
Pte2g00131 291 SMART sant 66 114 IPR001005 -
Pte2g00131 291 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00131 Pte-Chr2 1093419 1095103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00131 1 280 MYB Transcription Factor Family AT2G31180 48.043 7.30e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte2g00131 Myb_DNA-binding 4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00131 K09422 - gmx:100794205 292.352