Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00125 ATGGAATTTGCAAGACGCTGTTTCAATAAGTCGAGTCCTAAAGCCAAGGTGAGCTCATCAAAGAACAAAGAGGTCACAGGTGCAGGAAGAGAAGTTCCAAGACCACCAACCAATGAGGAAATGCCTTCTAGTACAACCAAGCAGAAGGCTGCTGCTGCCAAGCAGTATATAGAAAATCATTACAAGAACCAGATGAAGATCCTTCAGGAAAGAAAGGAGCGACGTGATATTCTAGAAAAGAAATTGGCTGATGCTGATGTCTCTGAGGAAGAGCAGAGTAATCTACTTAAGCATTTAGAGAAAAAGGAAACAGAATACATGCGTCGCCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCATTGACAATGATAGGGAAAGGGGCATTTGGAGAGGTGAGGATCTGCAGGGAGAAGACAACTGGACATGTATACGCCATGAAGAAGCTCAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTTGAACATGTGAAAGCTGAGAGGAATCTTCTTGCAGAAGTTGACAGCAACTGCATTGTTAAACTCTATTGTTCTTTTCAAGATGAAGAATATCTATATCTCATTATGGAGTATCTACCTGGAGGAGATATGATGACTTTACTGATGCGGAAGGATACACTGACTGAAGATGAGGCCAGGTTCTATGTCGGGGAAACTGTCCTGGCAATTGAGTCCATCCACAAACATAACTATATACATAGAGATATCAAGCCCGACAACTTGCTACTGGATAAAAACGGGCACATGAAATTATCAGATTTTGGATTGTGCAAACCTCTAGACCATAGCATTCTACAGGAGAAAGATTTTTCTGTGGGTAAAAACCTCAGTGGGGCACTCCAGAGTGATGGTCGTCCGGTGGCTTCAAAACGATCGCAACAGGAGCAACTGCAGCACTGGCAAAAAAATAGGCGTATGCTTGCATACTCTACTGTTGGAACACCTGACTATATTGCCCCTGAAGTTTTGCTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCTCTTGGCGCCATAATGTATGAAATGCTAGTTGGATATCCACCCTTTTACTCTGATGAGCCCATGTCAACTTGCCGTAAGATAGTGAATTGGAAAACTTATTTGAAATTTCCTGAAGAAGCTAAACTATCTGCAGAAGCAAAGGACCTTATTAGCAGGCTCTTATGTAACGTTGACCAAAGGCTTGGAACAAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTTAAAGGCATTGAATGGGACAAATTGTATCAAATGAATGCGGCTTTTATTCCTGAAGTCAATGGTGAATTGGATACTCAAAATTTTGAGAAGTTTGATGAGACGGACAACACAGTTCAAACTTCAACAAAATCAGGCCCCTGGAGAAAGATGTTGTCCTCTAAAGATGTCAACTTTGTGGGATACACATATAAGAACTTCGAAATTGTGAATGAACAACAGTTGCCAGGGATTGCGGAATTAAAAAAGAAGAGCACAAAAAATAAAAGGCCATCTATAAAGTCCCTGTTTGAAGACGAGTCTTCTGCTGGAAATCAACCTGCTCAAGGCAGTTTTATGAACCTCTTGCCTCCTCAAAGAGAAATTCCTGAGTAG 1626 0.4182 MEFARRCFNKSSPKAKVSSSKNKEVTGAGREVPRPPTNEEMPSSTTKQKAAAAKQYIENHYKNQMKILQERKERRDILEKKLADADVSEEEQSNLLKHLEKKETEYMRRQRHKMGADDFEPLTMIGKGAFGEVRICREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDHSILQEKDFSVGKNLSGALQSDGRPVASKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWKTYLKFPEEAKLSAEAKDLISRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMNAAFIPEVNGELDTQNFEKFDETDNTVQTSTKSGPWRKMLSSKDVNFVGYTYKNFEIVNEQQLPGIAELKKKSTKNKRPSIKSLFEDESSAGNQPAQGSFMNLLPPQREIPE* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00125 541 SUPERFAMILY Protein kinase-like (PK-like) 96 470 IPR011009 -
Pte2g00125 541 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pte2g00125 541 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte2g00125 541 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Pte2g00125 541 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Pte2g00125 541 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00125 541 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Pte2g00125 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Pte2g00125 541 MobiDBLite consensus disorder prediction 515 530 - -
Pte2g00125 541 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00125 541 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Pte2g00125 541 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Pte2g00125 541 MobiDBLite consensus disorder prediction 499 513 - -
Pte2g00125 541 MobiDBLite consensus disorder prediction 38 52 - -
Pte2g00125 541 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte2g00125 541 CDD MobB_NDR_LATS-like 53 114 - -
Pte2g00125 541 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte2g00125 541 MobiDBLite consensus disorder prediction 1 52 - -
Pte2g00125 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 470 - -
Pte2g00125 541 CDD STKc_NDR_like 117 482 - -
Pte2g00125 541 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00125 541 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Pte2g00125 541 Gene3D Transferase(Phosphotransferase) domain 1 203 269 - -
Pte2g00125 541 MobiDBLite consensus disorder prediction 499 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00125 Pte-Chr2 1034438 1042428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00125 1 540 AGC Kinase Gene Family AT4G14350 82.222 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pte2g00125 Pkinase 2.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00125 K08790 - zju:107422847 968.378