Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00123 ATGGACCATGTTATTGGCGGGAAGTTCAAGCTGGGGAGGAAGATTGGGAGTGGATCATTTGGTGAGCTTTATCTGGGTAATAATGTACAAAGTGGAGAGGACGTGACTGTGAAGGAATCTGCAAAGATCAAGCATCCCCAACTTCAATATGAGTCAAAACTGTACATGCTTCTTCAAGGAGGAACTGGTATTCCACACCTCAAGTGGTTTGGAGTTGAAAGAGAGTACAATATCATGGCTATTGATCTTCTTGGTCCAAGTTTAGAAGACTTGTTTAATTATTGCACTCGAAAATTCTCCTTAAAAACAGTTTTAATGCTTGCTGATCAGCTAATAAACAGAGTTGAGTATATGCACTCTCATGGATTTCTTCATCGCGATATCAAGCCTTACAACTTTTTAATGGGTCTAGGGCGCTAG 420 0.4048 MDHVIGGKFKLGRKIGSGSFGELYLGNNVQSGEDVTVKESAKIKHPQLQYESKLYMLLQGGTGIPHLKWFGVEREYNIMAIDLLGPSLEDLFNYCTRKFSLKTVLMLADQLINRVEYMHSHGFLHRDIKPYNFLMGLGR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00123 139 ProSiteProfiles Protein kinase domain profile. 9 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00123 139 PANTHER CASEIN KINASE-RELATED 8 136 - -
Pte2g00123 139 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Pte2g00123 139 SUPERFAMILY Protein kinase-like (PK-like) 4 136 IPR011009 -
Pte2g00123 139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Pte2g00123 139 Gene3D Transferase(Phosphotransferase) domain 1 85 139 - -
Pte2g00123 139 Pfam Protein kinase domain 10 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00123 Pte-Chr2 1023752 1028044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00123 8 135 MAP Kinase Kinase Kinase AT1G54960 29.496 5.94e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte2g00123 Pkinase 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00123 K08960 - mnt:21404312 257.299