Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00105 ATGACAAAGGGGAAGATAAAAGTAAGGATCAAGAGGAGCTACCTATACACATTCGGCAGTCATTGGTTAAATGTAAAGAATAAACCACATCCCCTACAAGGTCCTGATTATTCAAGAATTGTTCATTGCAACCAGCCTCATATCCAAGATGAATACACTCAATCATATCGTGACAATTCTATATCCACAACGAAATACAACGTCATAACCTTCTTACCCAAGGCACTCTTCGAGCAATTTCGGCGAGTTGCTAATTTGTATTTCCTTCTGGCTGCATGCCTTTCATTGACTCCTATGTCGCCATTTAACGCAACAAGCATGATTTCTCCTTTGGCTTTTGTTGTGGGGCTTAGTATGGGGAAGGAGGCATTGGAGGATTGGAATAGGTACACTCAAGACAAGAGTGTTAATTCCAGGAACGCCAATGTTCATGAAGGAAGTGGAGTCTTTGGTTTAAGGTCATGGCAAGAAGTTAAGGTTGGAGATGTAGTGAGAGTAGAGAAGGATGAGTTCTTTCCTGCCGATTTGCTGTTCCTGTCATCAAGTTATGAAGATGGGATTTGCTATGTGGAGACTATGAATTTAGATGGGGAGACAAATTTGAAGGTGAAGAAGTGCTTGGAGGTCACCATGACTTTGGAATCTGATGATAATTTTACTGGTTTTTCCGGTGAAATAAGATGCGAGAACCCAAACCCCAATCTTTACACCTTTGTAGGCAACTTTGATTATGAAGGTAAGGTTTATCCTATTGATCCTAGCCAGATTTTTCTTCGCGACTCCAAACTCAGAAATACAGAATATGTTTACGGAGTGGCAATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCGACAAAGTCTCCATCAAAAAGAAGTACAATTGAAAAGAGAATGGATTGGATCATATATGTTCTTTTTGTACTCCTCCTTGTGGTTTCCTTCATCAGCTCAGTGGGGTTTGCTGTAAGGACGAGATTCGACACGCCCAGGTGGTGGTACTTGGTTCCTGGTGATATTGAAGATCAGTATGATCCTAAACAACCCTTTAAAGCAGGCATTTACCACTTGGTCACTGCTCTCATTCTTTATGGATATTTGATTCCAATCTCACTGTATGTCTCAATAGAGATTGTAAAAGTCATACAGGCCACATTCATCAACCAGGACTTGCATATGTATGATGACGAGACTGAGGTTCCTGCTCAAGCAAGAACGTCAAATCTAAATGAGGAGTTGGGACAGGTTGATACAATTCTATCAGACAAGACTGGAACTTTGACATGCAATCAGATGGACTTTCTCAAGTGTTCCATTGCCGGTGCTGCCTACGGTGTACGTGCCAGTGAAGTCGAACGTGCTGCGGAAAAACAGATGGAATGTGAATTTGACAGCGAAATTGGTGAAAGAGATAGTGAGAGTCAATCAAATAACGGTAGTAAGAAGCCAGCAATAAAGTGTTTCAGCTTTGAAGACAATCGTCTCATGGATGGCAATTGGTTGAAAGAGCCTAAAGCTGAGTTTTACTGGTTGTTTTTTCGGATTTTGGCTGTTTGTCACACTGCTGTTCCTGAGTTGAACGAAGAAACTAACACCATAACATATGAAGCTGAATCACCTGATGAGGGAGCTTTCCTTGTAGCAGCAAGAGAGTTCGGATTCGAGTTTTTTAAACGCACAAATGCAAGTGTTTGTATTCATGAAATGTACTCAACGTCTGGACAACCAGTTGAGAGAGAGTACAAAATTCTTACACTATTGGATTTCACAAGCAAAAGGAAGAGAATGTCAGTGATTGTGAAGGATGAAGATGACAGCATCTTTCTCTTCTGCAAAGGAGCTGACAACATTATCTTTGATCGATTGTCGGACGAGGGCAGAATGTATCAAGAAGCCACAACCAAACATTTGAATGAATACGGAGAAGGCGGATTGCGGACATTAGCTCTTGCTTACAAGAAGCTTGATGAGCAAGAATATGCTTCGTGGAATGATGAGTTCCAGAAAGCCAAGACAACTGTTGGTGCTGAAAGGGAACAAATGCTTGAGAGTGTCTCCGAGAAGATGGAAAGGGGTTTGACCCTTGTTGGGGCTACTGCTGTGGAAGACAAACTTCAACAAGGAGTGCCTCAATGCATTGATAAACTCGCGCAATCTGGTCTGAAGCTTTGGGTTTTGACAGGAGACAAAATGGAGACTGCAATCAACATAGGATTTGCTTGCAGTTTGCTTCGCGAAGGAATGAAGCAAATGCGGATAGCAGCCAATAATGCAGATTCTGCAAATGCGGAAGACAAAGATGCAATCAAAGAGGAAGTACTGAAACAAATTACCAATTCCTCTCAAATGATAAAGCACGAGAGAGATCCTCATGCTGCGTTTGCATTAATTATCGACGGCAAAACTTTAACTTACGCATTAGAAGAAGACATGAAGCAAAACTTTTTTGATTTGGCTATCAATTGTGCATCTGTGATTTGTTGCCGCGTCTCCCCAAAGCAGAAGGCACTAGTGACAAGGCTAGTTAAAGAAGGGACTAAAAAGACTACCTTAGCAATTGGTGATGGAGCAAACGATGTTGGTATGATACAAGAAGCTGATATTGGAGTTGGCATCAGTGGTCATGAAGGTATGCAGGCAGTGATGGCAAGTGATTTTGCAATAGCACAGTTTAGATTCTTGGAGAGGCTGTTGTTAGTTCATGGACATTGGTGTTATAAGAGAATTGCTCAAATGATTTGCTACTTCTTCTACAAGAACATAGTCTTTGGCCTTACACTATTCTATTTTGAGGCATTTGCTGGTTTCTCAGGCCAATCAATGTATCATGACATATACATGCTTCTCTTCAATGTTGCCCTGACCTCATTGCCAGTCATCTCACTTGGAGCTTTAGAACAAGACGTGTCATCGGAAGTGTGCCTGCAGTTCCCTGCATTGTATCAACAAGGATCCAGAAACTTGTTCTTCGGCTGGGACAAGATACTTGGATGGATGGGAAATGGTCTATACTGTTCTGTCATAGTATTCTTCCTCACCATTGTCATCTTCTATGATCAACCATTTAGGTCTGATGGCCGTACAGCAGACATGTCTGCAGTTGGAACTGCAATGTTCACTTGCATTATCTGGGTAGTGAATTGCCAGATTGCACAAACATTGAACCATTTCACATGGATTCAACACATTCTCATCTGGGGTAGTATTAGTGCTTGGTACATATTTCTCTTAGTTTTTGGCATGTTTCCACTTTCTGGGGATTCCTACAGAATCTTTGCTGAAGTTCTAGGTCCTGCACCTTTATATTGGGTAGCTACAATTTTAGTAACAATAACATGCAACCTTCCATACTTAGCACACATATCTTTCCAGAGGTGCTTTAATCCATTGGATCATCACATCATTCAAGAGATGAAGTATTACAGGAAGGACATTGAGGACAGACATATGTGGACAAAGGAGAAGTCCAAAGCAAGGCAAAAAACAAAGATCGGTATCACAGTAAGAGTGGAAGCAAAGATCAGACATATCAAAGGGAAGATAAAGCATTCTCCTAAACCTAGCAGTATGTCTTCACCGTGA 3585 0.4137 MTKGKIKVRIKRSYLYTFGSHWLNVKNKPHPLQGPDYSRIVHCNQPHIQDEYTQSYRDNSISTTKYNVITFLPKALFEQFRRVANLYFLLAACLSLTPMSPFNATSMISPLAFVVGLSMGKEALEDWNRYTQDKSVNSRNANVHEGSGVFGLRSWQEVKVGDVVRVEKDEFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKKCLEVTMTLESDDNFTGFSGEIRCENPNPNLYTFVGNFDYEGKVYPIDPSQIFLRDSKLRNTEYVYGVAIFTGHDSKVMQNSTKSPSKRSTIEKRMDWIIYVLFVLLLVVSFISSVGFAVRTRFDTPRWWYLVPGDIEDQYDPKQPFKAGIYHLVTALILYGYLIPISLYVSIEIVKVIQATFINQDLHMYDDETEVPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVRASEVERAAEKQMECEFDSEIGERDSESQSNNGSKKPAIKCFSFEDNRLMDGNWLKEPKAEFYWLFFRILAVCHTAVPELNEETNTITYEAESPDEGAFLVAAREFGFEFFKRTNASVCIHEMYSTSGQPVEREYKILTLLDFTSKRKRMSVIVKDEDDSIFLFCKGADNIIFDRLSDEGRMYQEATTKHLNEYGEGGLRTLALAYKKLDEQEYASWNDEFQKAKTTVGAEREQMLESVSEKMERGLTLVGATAVEDKLQQGVPQCIDKLAQSGLKLWVLTGDKMETAINIGFACSLLREGMKQMRIAANNADSANAEDKDAIKEEVLKQITNSSQMIKHERDPHAAFALIIDGKTLTYALEEDMKQNFFDLAINCASVICCRVSPKQKALVTRLVKEGTKKTTLAIGDGANDVGMIQEADIGVGISGHEGMQAVMASDFAIAQFRFLERLLLVHGHWCYKRIAQMICYFFYKNIVFGLTLFYFEAFAGFSGQSMYHDIYMLLFNVALTSLPVISLGALEQDVSSEVCLQFPALYQQGSRNLFFGWDKILGWMGNGLYCSVIVFFLTIVIFYDQPFRSDGRTADMSAVGTAMFTCIIWVVNCQIAQTLNHFTWIQHILIWGSISAWYIFLLVFGMFPLSGDSYRIFAEVLGPAPLYWVATILVTITCNLPYLAHISFQRCFNPLDHHIIQEMKYYRKDIEDRHMWTKEKSKARQKTKIGITVRVEAKIRHIKGKIKHSPKPSSMSSP* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00105 1194 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Pte2g00105 1194 Gene3D - 546 697 IPR023299 GO:0000166
Pte2g00105 1194 FunFam Phospholipid-transporting ATPase 117 287 - -
Pte2g00105 1194 Pfam haloacid dehalogenase-like hydrolase 712 872 - -
Pte2g00105 1194 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1130 IPR032630 -
Pte2g00105 1194 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 428 660 IPR023299 GO:0000166
Pte2g00105 1194 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1124 IPR023298 -
Pte2g00105 1194 SUPERFAMILY Calcium ATPase, transduction domain A 147 285 IPR008250 -
Pte2g00105 1194 NCBIfam HAD-IC family P-type ATPase 825 935 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g00105 1194 NCBIfam HAD-IC family P-type ATPase 354 466 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte2g00105 1194 Gene3D - 698 894 IPR023214 -
Pte2g00105 1194 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1150 - -
Pte2g00105 1194 Pfam Phospholipid-translocating ATPase N-terminal 41 107 IPR032631 -
Pte2g00105 1194 SFLD Haloacid Dehalogenase 404 905 - -
Pte2g00105 1194 FunFam Phospholipid-transporting ATPase 564 695 - -
Pte2g00105 1194 Pfam Cation transport ATPase (P-type) 519 624 - -
Pte2g00105 1194 NCBIfam phospholipid-translocating P-type ATPase 56 1138 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte2g00105 1194 MobiDBLite consensus disorder prediction 463 483 - -
Pte2g00105 1194 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Pte2g00105 1194 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Pte2g00105 1194 CDD P-type_ATPase_APLT_Dnf-like 58 1014 - -
Pte2g00105 1194 Gene3D - 118 287 - -
Pte2g00105 1194 SUPERFAMILY HAD-like 409 899 IPR036412 -
Pte2g00105 1194 FunFam Phospholipid-transporting ATPase 697 894 - -
Pte2g00105 1194 SFLD p-type atpase 404 905 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00105 Pte-Chr2 819489 823073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00105 1 1192 Primary Pumps ATPases AT1G17500 68.543 0.0 1760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00105 K01530 - gmx:100778710 1798.87