Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00101 ATGCTTATTAAGTTGCTCTCCAATTATTTGCAGGATGAACTTTCAAGCCCCATTAGTGCTCGACTTTTCGAGCTTTACGACTCTGATCTGTTTCAACACACGCTTCAGAATTCTGAGGTCACATCCAGCTCAATTGGTTGCTACGAAGACAACTCCCCTTATGCAGCAAATGTCTCCTTAGATTTAGATACAGAAAGGAAGTTCAATATCAATAACAATTTAGTGAATACACCAACAACTACGACAACCACTAGTACTACTTCTACCAGTACTACTAACACAACAAGCAACACAGCAAACAACAGTAGCAATCTCTCCATACTTCTTGACTCTCAAGAAGAACTTGACAATGACATTTCTGCTTCCATAGATTTTTCTTCATCACCATCATTCTCAGTCCCTCCATTTCTCGCAACTCAGCAAGACCAATTTAATTTTACTTCTGTTCAGCCTCAGATTGCATTAGGAGATGGTCCAATTGCAGATGGGGTGCCTCAATATACTGCTGATACTGTTCCGCCTCTGATGGGAGCTTCATTGGTATCTATGTTTGAAGAGGATTGCTTCTCTTCAGTCCCTTCTTACGTACCTTTGAACTCTTCATCAACTGCATGTTCTTTTCTCAGTCCTGCCATGGCAGCATACATGCCTACTGGTCATATCAACACCACGTGGTCTGCTGACAGTTCTGGGATGTTTGATGGTAACATCATCCTGGGGTCTGAATTGCAACCAAAAGATCTGGATTACAAGGGTGAAAATGGTGGAATTTACTGCCCAGATTCAAGGGTATTCAACACCCCTGATCTCCAGGCACTCACCTGTGAGAGTCAGCAACTTGTTGTGGCTGGTCCTGGGAGTGCTGCTTCTTTGACACCAGAGATTTCAACTTTGGAAGACTCAGCTTTCAAGGTTGGAAAGCTCTCCGTGGAGCAAAGGAAAGAAAAAATTCATAGATACATGAAGAAAAGGAACCAAAGGAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACACTGGCGGACAGCAGACCTCGAGTTAGAGGAAGATTTGCAAAGAATGACGAGTTTAGCGAGACGCAGAGACAAGCTAGCAGCAACCACGAAGAAGAAGAAGATGAAGAAGTAGTTGTGAAAGAAGAAGATGATATGGTTGATTCCTCAAATTTCTTTGCTCACATCAGCGGAGTGAACTCCTTCAAATGCAACTATTCTTTACAGTCCTGGATTTAA 1236 0.4239 MLIKLLSNYLQDELSSPISARLFELYDSDLFQHTLQNSEVTSSSIGCYEDNSPYAANVSLDLDTERKFNINNNLVNTPTTTTTTSTTSTSTTNTTSNTANNSSNLSILLDSQEELDNDISASIDFSSSPSFSVPPFLATQQDQFNFTSVQPQIALGDGPIADGVPQYTADTVPPLMGASLVSMFEEDCFSSVPSYVPLNSSSTACSFLSPAMAAYMPTGHINTTWSADSSGMFDGNIILGSELQPKDLDYKGENGGIYCPDSRVFNTPDLQALTCESQQLVVAGPGSAASLTPEISTLEDSAFKVGKLSVEQRKEKIHRYMKKRNQRNFSKKIKYACRKTLADSRPRVRGRFAKNDEFSETQRQASSNHEEEEDEEVVVKEEDDMVDSSNFFAHISGVNSFKCNYSLQSWI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00101 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 97 371 IPR045281 GO:0009909
Pte2g00101 411 Coils Coil 355 375 - -
Pte2g00101 411 ProSiteProfiles CCT domain profile. 313 355 IPR010402 GO:0005515
Pte2g00101 411 MobiDBLite consensus disorder prediction 350 370 - -
Pte2g00101 411 Pfam CCT motif 313 355 IPR010402 GO:0005515
Pte2g00101 411 MobiDBLite consensus disorder prediction 350 380 - -
Pte2g00101 411 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00101 Pte-Chr2 806479 808787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00101 313 371 C2C2-CO-like Transcription Factor Family AT5G57660 43.750 2.29e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte2g00101 CCT 7.3e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00101 - - qsa:O6P43_003157 485.723