Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00097 ATGACGAGTCATCATGCTACAGCTGCTGGGACTTCATGTAATGTGAAGGTAATGGGATCGAAAGAATATGTCAACATGTCTTCTCCACCTCCTCTTTGTTCTAAGGAGTCGTTATTCTCAGCTGATACGGAGCTTGAGCTGGGGCTTGGTCTCAGCATTGGTGGCGGAAAAAATAAAGTGGGGAAAGCCAGGTCCTCTACATTTGTTGGTAGAATCTTGACAGCTAAGGACTTTCCTACTGCCATGGTGTCTTCTGCTGGACATTCAACTGCTTCTCCTCTCTTCTCAAACCGAGTGAATCCTCCCGTTGGTGCTGTTTCTGGGACAAAGAGAGCGGCGGACTCTGTTCCTCAAGAGGGTGGATCTCCCACTGCTGCTAGCCAGGTTGTTGGATGGCCACCTATAAGAACTCATAGGATGAACAGTTTGATAAACCAAGCCAAGTCACAAAGAGCTGACGAAGACAAAGACACCAGTGAATCCAATAAGTTTAAGGACCACGTATCCATCACAAAGGCCAACAAGTCTGATGTTAAAGGAAAAATGCATCTGGGGTTTGTGAAGGTGAATATGGATGGAGTGCAGATTGGAAGAAAGGTGGATTTGAATGCTCATACTAGTTATGAGAGCCTGGCCCACACAATAGAAGAAATGTTTCTCAGGCCTACCCATACCAGGGCTGCTAATCAATTAGGTGGAGAGAAGGAAGCAGCAACAAGAGCCTCTAAGCTTTTAGATGGATCATCAGAGTTTGTTCTCACTTATGAAGATAAGGAAGGTGATTGGATGCTTGTTGGGGATGTTCCATGGAGGATGTTTGTCAGCTCAGTGAAAAGGCTTAGAATGATGAGGACATCAGAAGCCAATGGACTTGCTCCAAAAGTTCAAGATAAAAGCAAGCAAGAAAGAAGTAGGCCCATTTAG 924 0.4524 MTSHHATAAGTSCNVKVMGSKEYVNMSSPPPLCSKESLFSADTELELGLGLSIGGGKNKVGKARSSTFVGRILTAKDFPTAMVSSAGHSTASPLFSNRVNPPVGAVSGTKRAADSVPQEGGSPTAASQVVGWPPIRTHRMNSLINQAKSQRADEDKDTSESNKFKDHVSITKANKSDVKGKMHLGFVKVNMDGVQIGRKVDLNAHTSYESLAHTIEEMFLRPTHTRAANQLGGEKEAATRASKLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFVSSVKRLRMMRTSEANGLAPKVQDKSKQERSRPI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00097 307 FunFam Auxin-responsive protein 179 295 - -
Pte2g00097 307 MobiDBLite consensus disorder prediction 106 129 - -
Pte2g00097 307 SUPERFAMILY CAD & PB1 domains 186 283 - -
Pte2g00097 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 290 IPR003311 GO:0005634|GO:0006355
Pte2g00097 307 Gene3D - 179 298 - -
Pte2g00097 307 Pfam AUX/IAA family 43 294 IPR033389 -
Pte2g00097 307 MobiDBLite consensus disorder prediction 288 307 - -
Pte2g00097 307 MobiDBLite consensus disorder prediction 145 165 - -
Pte2g00097 307 ProSiteProfiles PB1 domain profile. 184 287 IPR000270 GO:0005515
Pte2g00097 307 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00097 Pte-Chr2 749339 751981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00097 188 294 B3 DNA Binding Superfamily AT1G59750 32.710 1.14e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte2g00097 AUX_IAA 8.9e-65 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00097 K14484 - zju:107422467 317.39