Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00095 ATGGGAATGGGTTCTCTCAGCGCCAACATTTTCCCTGAAACTGATGCAGCAGCAGCTGCTATGATTACTTCCGGAATCGACAATGTTAAGCTGTTAATCCCAAAGATTGAACCAAATCTTGAACGTTTCGACGAACCAGTGTTGACCAATTCTACCCAACCAGCGAAGGACCCTAAAACAATGTTTTTCCCTGACTCTTCCCCCAGCATTTTGTCTAACTCCCCACGTACTCCTTCCTTGGACCCGAGTGCGACGACAGCTGAAGCCTCCGCCATGTATTCTTCCTCTGAACATGAAATGGTGTACTCCGAGTTTCATAGGATTTCTGAGCTCTTTCGTACTGCTTTTGCTAAACGGTTGGGTAAGTCTGGAGACACTCAGGATTTCGACCCAGACGCGGGTGCAATTGTGCCCGTACCAGAAGAGAACCAGGTCTCAACAGTACATGTGACCGGGAGGAACAAGCTTAAGGAGCTGGTCAGGGTTACAAAATTTGGGGTTGAAGATGAGATATATTTCAGAGACATTGTTAGACGCACCCGAATGACTTATGTTTCTTTAAGGATTATGTTCGCTATAGAGGATGGGAAACTCCGAGGTGGTCCCGGACTAAAAAAGCGGCTGAGAGCTGATCTGAGAGCTTCAGCATTGATGAGAGAACGTGGGCTGTGGTTGAACCGTGATAAGAGAATTGTGGGTACGATTCCGGGCATCGAAATTGGTGATTTATTCCTTTTTAGGATGGAGATGTGTGTGATTGGATTGCATGGTCAACATCAAGCTGGGATTGATTATCTGCCTGCAATTTACAGCTCAAACGGGGAGCCAATTGCGACTAGTGTTATAGTTTCTGGTGGGTATGAGGATGACGTGGACAGTGGTGATGTGATAATCTATACTGGTCAGGGAGGGCAGGACAAACATTATAGACAAAGCTTTCATCAGAAGCTAGATGGTGGGAATCTAGCGATGGAGCGAAGTATGCATCAAGGGATTGAAGTCAGAGTTATTAGAGGGGTTAAATACCCGGGAAGTCATACTTCTAAGGTGTATGTGTATGACGGGTTATATAGGATTGTTGATTGTTGGTTTGATGTAGGCAAGTCTGGTTTTGGAGTTTACAAGTATAAGCTTTTGAGAATTGAAGGGCAACCTCAAATGGGCAGTGAAAGTCTTAGGGTAGCTGCTAGTATTAAGTCTAGACCATTGGAAGTCAAACCAAAGGGTTACCTTTCTTTGGATATGTCAAACAAAAAGGAAAATGTTCCTGTGAGGGTTTTTAATGATATAGATTCCAACCAGGAGCCTTTGAATTATAATTATCTTTGCAGGACTGCCTTCCCACCATTTGCATTTCATCAAAGTGGGGATGGAAGTGGATGTAGTTGTCTTTCAGATTGTGGTGATGATTGCTTCTGTGCCTTGAAAAATGGAGGTGAATTCCCTTATGACTGTGGTGGATTCCTCGTGAAAGGGAAACCTGTTGTTTTCGAATGTGGTCCTTACTGTAGTTGTCCACCACATTGTCGGAACCGAGTTACACAAAAGGGGCTCAAAATTAGGTTGGAAGTGTTTAGATCTGGTGAAACAAGTTGGGGAGTCAGATCCTTAGAGCTGGTACACGCTGGTGCTTTTATTTGTGAATATACTGGGGTTGTTTTAACAAGGGAGCAAGCTCAGATTTTATCGATGAATGGTGACAAGTTGATTTATCCAAATCAATTTTCCGATAGATGGACCGAATGGGGGGATCTATCTCAGATATTTTCAGAATATGTCCGTCCTTCTTATCCATCAATTCCTCCACTGGATTTTGCCATGGATGTGTCTAAAATGAGGAATGTAGCATGTTATATGAGCCATAGTTCAACTCCTAATGTATTTGTTCAGCTTGTTCTGTATGATCATAACAATTTAATGTTCCCTCACCTCATGCTGTTTGCATTGGAAACTATTCCTCCTTTGAGGGAGCTTAGACTTGATTATGGAGTGGCTGATGACGTTACAGGGAAGTTGGCAATTTGTTACTGA 2031 0.4328 MGMGSLSANIFPETDAAAAAMITSGIDNVKLLIPKIEPNLERFDEPVLTNSTQPAKDPKTMFFPDSSPSILSNSPRTPSLDPSATTAEASAMYSSSEHEMVYSEFHRISELFRTAFAKRLGKSGDTQDFDPDAGAIVPVPEENQVSTVHVTGRNKLKELVRVTKFGVEDEIYFRDIVRRTRMTYVSLRIMFAIEDGKLRGGPGLKKRLRADLRASALMRERGLWLNRDKRIVGTIPGIEIGDLFLFRMEMCVIGLHGQHQAGIDYLPAIYSSNGEPIATSVIVSGGYEDDVDSGDVIIYTGQGGQDKHYRQSFHQKLDGGNLAMERSMHQGIEVRVIRGVKYPGSHTSKVYVYDGLYRIVDCWFDVGKSGFGVYKYKLLRIEGQPQMGSESLRVAASIKSRPLEVKPKGYLSLDMSNKKENVPVRVFNDIDSNQEPLNYNYLCRTAFPPFAFHQSGDGSGCSCLSDCGDDCFCALKNGGEFPYDCGGFLVKGKPVVFECGPYCSCPPHCRNRVTQKGLKIRLEVFRSGETSWGVRSLELVHAGAFICEYTGVVLTREQAQILSMNGDKLIYPNQFSDRWTEWGDLSQIFSEYVRPSYPSIPPLDFAMDVSKMRNVACYMSHSSTPNVFVQLVLYDHNNLMFPHLMLFALETIPPLRELRLDYGVADDVTGKLAICY* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00095 676 ProSiteProfiles Pre-SET domain profile. 459 517 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g00095 676 Gene3D SET domain 391 676 IPR046341 -
Pte2g00095 676 ProSiteProfiles YDG domain profile. 233 380 IPR003105 -
Pte2g00095 676 Pfam Pre-SET motif 415 512 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g00095 676 SUPERFAMILY PUA domain-like 214 389 IPR015947 -
Pte2g00095 676 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 91 675 IPR025794 GO:0016571
Pte2g00095 676 SMART preset_2 412 504 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte2g00095 676 SUPERFAMILY SET domain 405 664 IPR046341 -
Pte2g00095 676 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 215 397 - -
Pte2g00095 676 SMART set_7 520 669 IPR001214 GO:0005515
Pte2g00095 676 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 116 664 - -
Pte2g00095 676 Pfam SET domain 532 663 IPR001214 GO:0005515
Pte2g00095 676 ProSiteProfiles PUA domain profile. 323 341 - -
Pte2g00095 676 SMART G9a_1 228 384 IPR003105 -
Pte2g00095 676 Gene3D - 230 390 IPR036987 -
Pte2g00095 676 ProSiteProfiles SET domain profile. 520 663 IPR001214 GO:0005515
Pte2g00095 676 Pfam SAD/SRA domain 232 384 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00095 Pte-Chr2 717042 719072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00095 174 665 Su(var)3-9 homologs AT5G04940 40.161 1.35e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte2g00095 SAD_SRA 2.9e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00095 K11420 - qsa:O6P43_003131 946.421