Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00093 ATGGCTAGCCATATGGGTTTTGGTGTAATAGAAGATGATGGTAGGAGGAAAGGTCCTTGGACTACTGAGGAAGACAGGCTTTTGATTGAGTATGTCAAGTTGCATGGTGAAGGTAGATGGAATTCTGTGGCAAGTCTTGCAGCTTTGCATTGTCAGACTTTAATGTACATATCTCAAGCTGTATTTGGCTTACATAGGAAATAA 204 0.4069 MASHMGFGVIEDDGRRKGPWTTEEDRLLIEYVKLHGEGRWNSVASLAALHCQTLMYISQAVFGLHRK* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00093 67 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 13 50 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte2g00093 67 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 44 IPR017930 -
Pte2g00093 67 Pfam Myb-like DNA-binding domain 17 46 IPR001005 -
Pte2g00093 67 SUPERFAMILY Homeodomain-like 14 48 IPR009057 -
Pte2g00093 67 ProSiteProfiles Myb-like domain profile. 12 44 IPR001005 -
Pte2g00093 67 CDD SANT 19 45 IPR001005 -
Pte2g00093 67 SMART sant 16 57 IPR001005 -
Pte2g00093 67 Gene3D - 11 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00093 Pte-Chr2 707796 708069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00093 12 49 MYB Transcription Factor Family AT3G24310 78.947 6.06e-17 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g00093 Myb_DNA-binding 2.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00093 K09422 - fve:101312043 89.3521