Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00092 ATGCATAAAACATTAAGGTGGTCAACAATTGCAAGAAGTTTGCCTGGAAGGACTGACAATGAAATTAAGAATTACTGGAGGACTCATTTCAAGAAAAAGGTCAAAGCTCCATCTGATGCGGCTGGAAGGGCCAAAAGTCGCTTCCTAAAGAGGCAACAGTTTCTCCTGCAGCTGCAGCAGCAGGAGCAGCAGAAGCAGCAACAACTTCAGCAGCAGCAACAAGTTCAATTCAATCCAATGGAAATGAAGGGGATCGTTTCTTTGCTTGATGACAACGACTACAGAACTCCATTTTTGTCCCAAGCAAGACAAGAGATAGGTTTAATGTATCCCATTCCCACCAGTACTTCTACTGAGGAGCAAGGCTACTTGTTCTCCATGCTGAATGAAAATACACCTTCACCAGAAGGCCCAAATGAGGACAGTCAGGACATGATGTGGGATGGACTGTGGAACTTCTATGATTTCCATAACAATTTCAGTGGGGCATGTGCAACGAGCAAAACCAGTCTGCACAACTTAGTCGCCCCTTCTTGCTAG 540 0.4481 MHKTLRWSTIARSLPGRTDNEIKNYWRTHFKKKVKAPSDAAGRAKSRFLKRQQFLLQLQQQEQQKQQQLQQQQQVQFNPMEMKGIVSLLDDNDYRTPFLSQARQEIGLMYPIPTSTSTEEQGYLFSMLNENTPSPEGPNEDSQDMMWDGLWNFYDFHNNFSGACATSKTSLHNLVAPSC* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00092 179 SUPERFAMILY Homeodomain-like 5 35 IPR009057 -
Pte2g00092 179 CDD SANT 2 30 IPR001005 -
Pte2g00092 179 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 100 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte2g00092 179 ProSiteProfiles Myb-like domain profile. 1 30 IPR001005 -
Pte2g00092 179 Gene3D - 1 34 - -
Pte2g00092 179 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 34 IPR017930 -
Pte2g00092 179 Coils Coil 51 78 - -
Pte2g00092 179 Pfam Myb-like DNA-binding domain 6 29 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00092 Pte-Chr2 706600 707276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00092 6 180 MYB Transcription Factor Family AT4G13480 42.487 3.95e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte2g00092 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00092 K09422 - gmx:100795981 181.8