Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00080 ATGGCGCCGAAAACACCCAAGGTAAGCAGAAACCCTGATCTAATCCGAGGGGTTGGGAAGTATTCACGGTCGAAAATGTACCACAAGCGAGGTCTTTGGGCTATCAAGGCTAAGAATGGGGGTGTCTTCCCTCATCATGAAGCTAAGCCTAAGGCTGCTCCTCCTGCTCAGAAGCCACCAAAGTTCTACCCCAGCTGA 198 0.5152 MAPKTPKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPHHEAKPKAAPPAQKPPKFYPS* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00080 65 PANTHER 60S RIBOSOMAL PROTEIN L6 1 64 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pte2g00080 65 MobiDBLite consensus disorder prediction 44 65 - -
Pte2g00080 65 Pfam Ribosomal protein L6, N-terminal domain 4 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00080 Pte-Chr2 619416 619613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00080 4 65 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 80.645 4.43e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00080 K02934 - csv:101222777 118.242