Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00062 ATGCTCTCAACTTCAAATAGCTTGATGTTTCTTCTTCTCTTTGTTTCTTTTTGTTTGGTATTGGTATGTGCTGATGCTCAACTCTTCAGAAGAGTTAGAAGTAAGAAATTTGCTTACAAGAATATTGTAGTAGACCAATCTGGGTACGGAAACTTTAGGACTATACAGTCTGCCATTGATTCAATACCCTCCAACAACATCTTCTGGACTTCAATCAAAGTCAAAGCAGGCAAGTATAGGGAAAAAGTCAGAATCCCTTATGACAAGCAATATATAATTCTGAAAGGAGAAGGAAGGAGAAAGACTGAAGTGGTTTGGGATGATCATGATAATCTTCTCCAAAGCCCTACCTTCATTTCTGAAGCCAATAATACAGTTATCAAAAGTATTAGCTTCAGGAATTCTTTCAACAACCCTTTGAATAATAAGAGAAGGCTACCAGCAGTTGCAGTTTTGGTATTAGGAGATAGAACAAGTTTCTACAAATGTGACTTCTATGGCGTGCAAGACACTTTGTGGGATGAACAAGGAAGACATTACTACAAACGTTGCACAATCCAAGGAGCTGTTGATTTCATTTTTGGTAGTGGCCAATCCATTTTTGAGCAATGTACCATAAATATGTTTGGGAATGCTTTAGATCGTGGTCTTCCAGGCTTCATAACTGCCCAAGGGAGAGATGGGGCAACGGAGACGAACGGGTTCGTGTTCAACAACTGCTCCGTGCTCGGCACTGGCTCCACCTACTTGGGACGGCCATGGAGGTCATATGCAAGAGTGCTATTCTACAAAACTTACATGTCAAGCGTTGTTCAACCTAAGGGTTGGCAATCCTGGCATTCTGCAGGCTCTGAACAAAAGTTGGATTTTGCAGAGTATGGTTGTTTCGGACCTGGATCGGACACATCCCGTCGCGTGCCTTGGGAGAAGCAATTGGATGTCAAAGTAATAGAGGAAAGGATTAGTATGAGTTTCATTGACTCCGATGGCGATGGCTGGCTTACCAACCAACCTATTTAA 1020 0.4176 MLSTSNSLMFLLLFVSFCLVLVCADAQLFRRVRSKKFAYKNIVVDQSGYGNFRTIQSAIDSIPSNNIFWTSIKVKAGKYREKVRIPYDKQYIILKGEGRRKTEVVWDDHDNLLQSPTFISEANNTVIKSISFRNSFNNPLNNKRRLPAVAVLVLGDRTSFYKCDFYGVQDTLWDEQGRHYYKRCTIQGAVDFIFGSGQSIFEQCTINMFGNALDRGLPGFITAQGRDGATETNGFVFNNCSVLGTGSTYLGRPWRSYARVLFYKTYMSSVVQPKGWQSWHSAGSEQKLDFAEYGCFGPGSDTSRRVPWEKQLDVKVIEERISMSFIDSDGDGWLTNQPI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00062 339 Pfam Pectinesterase 41 310 IPR000070 GO:0030599|GO:0042545
Pte2g00062 339 Gene3D - 37 339 IPR012334 -
Pte2g00062 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 335 - -
Pte2g00062 339 FunFam Pectinesterase 36 338 - -
Pte2g00062 339 ProSitePatterns Pectinesterase signature 2. 186 195 IPR033131 -
Pte2g00062 339 SUPERFAMILY Pectin lyase-like 40 329 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00062 Pte-Chr2 511030 513645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00062 40 285 Carbohydrate Esterase AT2G19150 45.749 1.91e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00062 - - qsa:O6P43_026793 460.299