Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00058 ATGCCGGAGCTTCGTAGAGGAGTCAAAAGACGAGGCCGTACCCCAGCTACTGTAGCACCGAAGAAGCCGAACACCTCATCGCCACCACCACTCACAGGAAATTACGGGAAGACTAGGGCCGCGACTAGGAGGTTGAAGCAGCAGAACAAGGAGAGAGAAGAAGCAGAAGAACAACTGCGTCACAAGGAGGAAAAAAAGGCTTTGATTCTGATTACTGAGAAGGAAGGAGGGGACACTGACTCTGAACCAAATAAGGTGAAGCGGGTAAAGAGGGACAAGCAAGAAGTTATACTTGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGGAGTTATGGGCGATGATAGTGGTGGGTCTAATAAGGCTGGTGGGCATGAAGAAGAAGGGAATGCGTCTCCTTTTCCTGATAGGGTGCAACTTGGATCTTCCCCAATCTATAAGGTAGAGAGGAAACTGGGCAAAGGTGGATTTGGTCAGGTTTTTGTTGGTCGCCGTGTTGCTGGTGCTAATGATCGTGGTGCTCTAGAGGTTGCACTGAAGTTTGAGCATAGAAACAGCAAAGGATGTAACAGTAGTCCTCCTTATGAGTGGCAAGTGTACAACACTCTCAGCGGCAGCTATGGAGTACCAAAAGTTCACTATAAAGGAAGACAAGGAGATTACTACATAATGGTTATGGATATGCTTGGACCCAGCTTGTGGGATGTGTGGAATACTTCAGGACAGGCGATGACTTCCGAAATGGTAGCATGCATTGCAGTTGAATCCTTGTCAATTCTGGAGAAGATGCACTTGAGAGGTTATGTGCATGGAGACGTGAAACCAGAAAACTTCTTACTCGGTCAGCCATCTACACCTCAAGAAAAAAAACTGTTTCTTGTTGACCTTGGATTAGCAACAAAATGGAAAACCAGCTCCAACCATCATGTTGAATACGATCAACGTCCTGATATGTTCAGAGGGACTGTTCGATATGCTAGTGTTCATGCACATTTGGGTAGAACAGCTAGTAGAAGAGATGACCTCGAATCTCTTGCATACACACTCATTTTTCTTCATAAGGGTAGGCTTCCATGGCAAGGTTATCAGGGAGACAACAAATCCTTCCTTGTTTGTAAGAAAAAGATGTCAACATCTCCCGATATGCTTTGTTGCTTTTGCCCTCCTCCTCTGAAGCAGTTTCTCGAGATTGTAGTGAACATGAAGTTTGATGAAGAGCCTAATTATTCTCGGCTTATATCTTTGTTTGATGGTATGATGGGACCCAATCCTGCACTGCGACCGATAAATACTGAAGGTGCCTTAAAGGTTGGCCAAAAGAGAGGTAGATTAAATATTGAGGAAGATGATGGGCAACCCAAAAAGAAAGTTCGTCTCGGAGTTCCTGCAACACAGTGGATATCAGTTTACAATGCTAGAACGCCAATGAAACAAAGGTACCATTACAATGTCGCAGATGTAAGATTGGCACCACATGTGGAGAGAGGGATTGCAGATGGCTTGCTTATTAGTTGTGTGTCATCTTGTTCCAATCTCTGGGCTATTATTATGGATGCCGGAACTGGTTTTTCTAGTCAAGTGTATGAGTTGTCTCCTTTGTTCTTACACAAGGAATGGATTATGGAACAATGGGAGAAGAACTATTATATCACATCTATCGCTGGAGCCAATAATGGGAGCTCTTTGGTTGTGATGTCTAGAGGCACGCACTACACTCAGCAATCTTACAAAGTAAGTGATTCATTCCCCTTTAGATGGATAAACAAGAAATGGAGAGAAGGTTTTCATGTGACCTCAATGGCTACTGCTGGAAGCCGCTGGGGTGTTGTAATGTCAAGAAATGCAGGATTTGCTGATCAGGTGGTAGAACTTGATTTTCTTTATCCAAGTGAGGGTATTCATCGGCGATGGGATAACGGCTATCGGATAACAGCAACTGCTGCTACATTGGATCAATCAGCTCTTATTTTGAGCATCCCCAAACGTAGGCCTAATGATGAGACTCAAGAAACTCTACGTACTTCTCAATTTCCTAGCACCCATGTAAAGTTTCCCTTTTAA 2061 0.4415 MPELRRGVKRRGRTPATVAPKKPNTSSPPPLTGNYGKTRAATRRLKQQNKEREEAEEQLRHKEEKKALILITEKEGGDTDSEPNKVKRVKRDKQEVILEEEEEEEEEEEGVMGDDSGGSNKAGGHEEEGNASPFPDRVQLGSSPIYKVERKLGKGGFGQVFVGRRVAGANDRGALEVALKFEHRNSKGCNSSPPYEWQVYNTLSGSYGVPKVHYKGRQGDYYIMVMDMLGPSLWDVWNTSGQAMTSEMVACIAVESLSILEKMHLRGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWKTSSNHHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMSTSPDMLCCFCPPPLKQFLEIVVNMKFDEEPNYSRLISLFDGMMGPNPALRPINTEGALKVGQKRGRLNIEEDDGQPKKKVRLGVPATQWISVYNARTPMKQRYHYNVADVRLAPHVERGIADGLLISCVSSCSNLWAIIMDAGTGFSSQVYELSPLFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSRGTHYTQQSYKVSDSFPFRWINKKWREGFHVTSMATAGSRWGVVMSRNAGFADQVVELDFLYPSEGIHRRWDNGYRITATAATLDQSALILSIPKRRPNDETQETLRTSQFPSTHVKFPF* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00058 686 Coils Coil 86 109 - -
Pte2g00058 686 FunFam casein kinase 1-like protein HD16 119 458 - -
Pte2g00058 686 CDD STKc_CK1 146 416 - -
Pte2g00058 686 SMART serkin_6 146 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00058 686 Pfam Protein kinase domain 146 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00058 686 MobiDBLite consensus disorder prediction 98 113 - -
Pte2g00058 686 ProSitePatterns Protein kinases ATP-binding region signature. 152 180 IPR017441 GO:0005524
Pte2g00058 686 MobiDBLite consensus disorder prediction 1 140 - -
Pte2g00058 686 ProSiteProfiles Protein kinase domain profile. 146 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00058 686 Gene3D Transferase(Phosphotransferase) domain 1 119 450 - -
Pte2g00058 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Pte2g00058 686 SUPERFAMILY Protein kinase-like (PK-like) 146 425 IPR011009 -
Pte2g00058 686 Coils Coil 38 72 - -
Pte2g00058 686 PANTHER CASEIN KINASE-RELATED 146 666 - -
Pte2g00058 686 MobiDBLite consensus disorder prediction 44 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00058 Pte-Chr2 477356 483772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00058 129 382 EF-hand Containing Proteins AT2G17890 25.468 1.01e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pte2g00058 Pkinase 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00058 - - jre:109007186 1097.8