Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00038 ATGGATTCTTCTTCACCATCTTCTGTTTCAGCTTCAGCTGCTTCACCTCAGTCTCACCCCCAAAACTGGCTTGCTTTCTCTCTCTCGAATCACTTCCCTTCTTCTACCTCACCTCCATCTCTGCACCAACAACCTGATCTCTCTCTCTTCCAATCCTTTGATTCCTCAGGTGTTTCTACGCCACAAGTTGCAGATGTTACTACTACAAACTTCACTGGCGTTCGCAAATTTGAGGATTTTCTTGGCGGTGGTTCTGCCACAACAATAACGACTCCTGCTGCACCGATTACTCAGTTTTCCACCGACTCTACTCTCAATTTGACCGACGCAGACGTATACGACTCTGAGCTCAAATCTATAGCAGCTAGCTTTCTTCGTGGATATACGTCAACCCAACAACCTCAAGTCCAAAAAGCACCACCTTCACCGCCAGGGACGGCGTTGATTCCAGCTGGCCCTCCTAAGAAAACCGCTGACAGTTTTGGCCAACGCACTTCCATTTACCGCGGCGTCACTCGGCATAGGTGGACAGGAAGATACGAAGCACATCTTTGGGATAACAGCTGCAGAAGGGAAGGGCAAAGTAGAAAAGGAAGACAAGGTGGTTACGATAAGGAGGAGAAGGCAGCAAGAGCTTATGATCTTGCAGCCCTCAAGTATTGGGGTACAACCACCACGACAAATTTTTCTATTACAAACTATGAAAAGGAACTGGAAGAGATGAAGAACATGACAAGGCAGGAATTTGTTGCTTCTCTACGAAGGAAAAGTAGTGGTTTTTCTAGAGGAGCATCCATATACAGAGGAGTCACAAGGCATCACCAGCATGGTCGCTGGCAAGCAAGAATAGGAAGAGTTGCTGGCAACAAAGATCTATACCTTGGCACATTCAGCACTCAAGAAGAGGCTGCTGAGGCCTACGATATTGCCGCTATTAAATTCAGAGGACTAAACGCTGTGACAAACTTTGACATGAGTCGCTACGATGTGAAAAGCATTGCAAACAGCAACCTTCCAATTGGGGGTCTGTCAAACAAGTCCAAGACTTGTTTAGATGCTGCTGTTTCTGACAGCACTAAGATCCAGGAAGGCAACAGATCAAATGAGAGAGATAATCTCTCTTCTTCTTCATCTGTTGTAACCTTTGCATCATCTCATCCTTCAAGTTCTACTCTAAGCTTTGCCGTACCAATCAAACAAGACCCTTCAGACTACTGGTCCCTTCTGGGATACCAAAACCCTTCTCTTCAAAATCCCAAGAACTCAACTAGTTTTGCACAAACTCCATTGTTCCCTTCAACGTCCATTGCTACACCCTTCAGCATGGAGTACTCAGGCGCTGCATCTAATTGCTGTGGCAGTGAAAGCAATAATCGTAATGGATTTTCTAGTGCATCGAGCATGTTCAGTCAGCAACAGACTGGTTGTGGCACTTCAAGTCCCATACAGTTTGCTCAACCTATCACTACTGTTAGCAGCAGCCACAATAGTAGTAGTTACGAGGGATCTTCTTCTTCAGTCTTTGGAAACTGGATAAGTCCAACTTTTCAAACACTCCAAGCTCATCATGCAAAACCCAGTCTTTGTCAAACCCCGATTTTTGGCATGGAGTAA 1614 0.4554 MDSSSPSSVSASAASPQSHPQNWLAFSLSNHFPSSTSPPSLHQQPDLSLFQSFDSSGVSTPQVADVTTTNFTGVRKFEDFLGGGSATTITTPAAPITQFSTDSTLNLTDADVYDSELKSIAASFLRGYTSTQQPQVQKAPPSPPGTALIPAGPPKKTADSFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFSITNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSNLPIGGLSNKSKTCLDAAVSDSTKIQEGNRSNERDNLSSSSSVVTFASSHPSSSTLSFAVPIKQDPSDYWSLLGYQNPSLQNPKNSTSFAQTPLFPSTSIATPFSMEYSGAASNCCGSESNNRNGFSSASSMFSQQQTGCGTSSPIQFAQPITTVSSSHNSSSYEGSSSSVFGNWISPTFQTLQAHHAKPSLCQTPIFGME* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00038 537 PRINTS Ethylene responsive element binding protein signature 306 326 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 PRINTS Ethylene responsive element binding protein signature 168 179 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 ProSiteProfiles AP2/ERF domain profile. 266 324 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 Pfam AP2 domain 266 316 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 Pfam AP2 domain 167 222 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 FunFam AP2-like ethylene-responsive transcription factor ANT 166 232 - -
Pte2g00038 537 SUPERFAMILY DNA-binding domain 265 326 IPR016177 GO:0003677
Pte2g00038 537 SMART rav1_2 167 236 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 SMART rav1_2 266 330 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 CDD AP2 265 326 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 420 - -
Pte2g00038 537 CDD AP2 166 229 IPR001471 GO:0003700|GO:0006355
Pte2g00038 537 Gene3D AP2/ERF domain 167 232 IPR036955 GO:0003700|GO:0006355
Pte2g00038 537 Gene3D AP2/ERF domain 266 326 IPR036955 GO:0003700|GO:0006355
Pte2g00038 537 SUPERFAMILY DNA-binding domain 166 231 IPR016177 GO:0003677
Pte2g00038 537 FunFam AP2-like ethylene-responsive transcription factor 265 326 - -
Pte2g00038 537 ProSiteProfiles AP2/ERF domain profile. 167 230 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00038 Pte-Chr2 305267 308094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00038 110 538 AP2-EREBP Transcription Factor Family AT5G57390 56.849 5.05e-144 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pte2g00038 AP2 2.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00038 K09285 - qsa:O6P43_002849 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00038 2 305267 308094 Pte2g00038 2 305267 308094 RCT