Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00022 ATGCCGACTATGGGGTCATCTCTAAGTTGCTGCAATTCAGAGAGAATAGATGAAGGGGCACCAACCATTGGTGGGGCTAATCCATCATGGAGGATATTCACATACAAGGAATTGCATACAGCTACAAACGGTTTCCATGAAGATGATAAACTTGGTGAAGGTGGATTTGGAAGTGTATATTGGGGAAAAACTACAGATGGCCTTCAGATAGCTGTCAAGAAATTGAAGGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTTGAAGTTGAGGTTCTAGGAAGAGTTAGGCACAAAAACCTTCTAGGTCTAAGGGGCTATTGTGCTGGGACTGATCAGAGACTTATAGTCTACGACTACATGCCAAATCTCAGCTTGCTTTCTCATCTCCACGGTCAATTTGCCAGTGAAGGTCGACTGGATTGGAGAAAGAGAGTAAAGATTGCACTTGGTTCTGCTGAAGGCTTAAGGTATTTGCACCATGAGGTCACACCCCACATCATCCACAGAGACATCAAGGCGAGTAATGTGCTCTTGGATGAAGATTTCGAACCCCTTGTTGCTGATTTTGGATTTGCAAAGCTAATCCCAGAAGGAGTTAGCCACATGACTACACGAGTGAAGGGTACATTGGGGTACTTGGCGCCTGAGTATGCTATGTGGGGGAAGGTCTCAGAAAGTTGTGATGTTTATAGTTTTGGAATTCTTCTGTTGGAAATCATCACAGGAAGGAAACCAATTGAAAAGCTACCTGGTGGAATTAAGAGAACAATCACCGAATGGGCTGAACCATTGATAAGTTACGGAAAGTTCAAGGAGCTTATTGATCCAAAGCTACGTGGGAACTTTGACGAGATCCAATTCAAGCAGTTCATCAATGTGGCTGCTCTATGTGTGCAGAGTGACCCTGACAACCGTCCTAACATGCAAGAAGTTGTCAGACTTCTGAAAGGCTATGACATTCAAGATAAAGTGAAGCAAATGAGGATTGACAGTGTGAAATATGATCAAAAGTTAATGGAGCTTGACCAAACTTCTGATGATGATGAAAGTGGAGGCATTCATGGGAAGAATAATGGCTATGGTGTGTTCAGTGCCATTGATGTGCAGAAAATGGAAGACACTTGCAAGAAAGTTGCAGACCAGAAATTTGCCAGACATGTTTGA 1167 0.431 MPTMGSSLSCCNSERIDEGAPTIGGANPSWRIFTYKELHTATNGFHEDDKLGEGGFGSVYWGKTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQFASEGRLDWRKRVKIALGSAEGLRYLHHEVTPHIIHRDIKASNVLLDEDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIITGRKPIEKLPGGIKRTITEWAEPLISYGKFKELIDPKLRGNFDEIQFKQFINVAALCVQSDPDNRPNMQEVVRLLKGYDIQDKVKQMRIDSVKYDQKLMELDQTSDDDESGGIHGKNNGYGVFSAIDVQKMEDTCKKVADQKFARHV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00022 388 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Pte2g00022 388 SUPERFAMILY Protein kinase-like (PK-like) 27 325 IPR011009 -
Pte2g00022 388 Gene3D Transferase(Phosphotransferase) domain 1 121 335 - -
Pte2g00022 388 ProSiteProfiles Protein kinase domain profile. 45 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00022 388 CDD STKc_IRAK 51 318 - -
Pte2g00022 388 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 333 - -
Pte2g00022 388 FunFam PTI1-like tyrosine-protein kinase At3g15890 19 120 - -
Pte2g00022 388 Pfam Protein kinase domain 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00022 388 PANTHER OS01G0253100 PROTEIN 26 320 - -
Pte2g00022 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pte2g00022 388 Gene3D Phosphorylase Kinase; domain 1 23 120 - -
Pte2g00022 388 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00022 Pte-Chr2 188092 190503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00022 33 355 Trihelix Transcription Factor Family AT1G70460 45.723 9.40e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pte2g00022 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00022 - - rcu:8262025 625.935