Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00011 ATGATCTTATCTGTTCCTTTTCTATTTTTCGTCAATTTTACTGAGTTATCTCTGAATCTGCAAACGAAGTTGAAAATCATAATCGAAATGGTATTTTGGTGGCCTTTACTAGTTTTAGCCTTCGCTTATGCTATATGTAGGTTCCTTCTTATGCTCATTCCTCCCAATGTCCCTTCCATTGAGGTGGACGCATCTGATGTGTTGGAAGATGAAAATCAAACTAAAGAGAACAGCTTCATTTATATACCACCAAGAGGAAGAGGACAGCAATCAGACAAGAAAGTTCAATGCTACGAACCTGCAACCATGAAATACTTAGGATACTATCCTGCATTGACGGCTGAGGAGGTCAAGGAGCGTGTAGCTCAAGCAAGGAAGGCACAGAAAATATGGTCAAAAAGTAGCTTCAAGCAAAGACGCCAGTTTTTGCGCATTCTGTTGAAGTACATAATCAAACACCAGTCACTTATATGCGAAGTATCTTCACGAGACACAGGGAAAACAATGGTAGATGCTTCTTTAGGGGAGATAATGACAACATGTGAGAAAATCAATTGGCTTCTTTCAGAAGGCGAGCAGTGGCTGAAACCTGAATACAGATCCTCTGGGAGAGCAATGTTACATAAAAGATCCAGAGTAGAATTTCACCCTCTTGGTGTTGTTGGTGCCATTGTTTCATGGAACTATCCTTTCCACAACATTTTTAATCCTATGCTGGCAGCAGTTTTTTCAGGAAATAGCATTGTGATCAAGGTATCTGAACATGCAAGTTGGTCAGGTTGCTTCTACTTCCAGATTATCCAGTCAGCCCTCACAGCTGTAGGAGCACCTGAGAATGTGGTGGATGTGATCACAGGGTTTGCTGAAACTGGAGAAGCACTAGTGTCCTCTGTGGACAAAATGATATTCGTTGGTTCTCCAGGTGTTGGCAAGATGATCATGAGAAATGCTGCTGACTCACTTATACCAGTAACACTGGAGCTTGGTGGAAAAGATGCATTTATTGTCTGTGAAGATGTGGATGTAGAACATGTTGCACAAATTGCTGCTAGAGGTGTCCTGCAATCCAGTGGGCAAAATTGTGCCGGGGCTGAAAGATTCTATGTTCATAGGGAAATCTACTCTTCATTTGTAGCTCAAGTGATAAAAATTGTAAAATCCATTACAGCTGGTCCACCACTTGCTGGAAAGTATGATATGGGAGCCATTTGTTTGCATGAGCTCTCCGAAAAACTTGAAAGCCTAGTGGTTGATGCCACAGACAAGGGAGCAGAAATAGTTGCTCGTGGAAGTTTAGGTCACATTAGTGAAGGTGCAGTCGATCAATTTTATCCACCAACTGTCCTTGTAAATGTGAACCACACTATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTTAACACAGATGAAGAGGCTATCAAGCTCGCTAATGATTCAAAATACGGGCTTGGTTGTGCTGTGTTCTCTGGCAGTCAGCAGCGAGCCAGAAACATAGCGTCACAGATACATTGTGGAGTTGCTGCTGTCAATGATTTTGCATCAACATACATGTGTCAGTCCCTACCTTTTGGTGGTGTGAAGCACAGCGGTTTTGGCCGATTTGCTGGTGTGGAAGGGTTGCGAGCATGCTGCCTTGTAAAGTCCGTTGTTGAGGATAGATGGTGGCCTTTAATAAAAACCAAGATACCAAAACCTATTCAGTACCCAGTTGCAGAAAATGGATTTGAATTTCAAGAGTCATTAGTTGAAGTTCTCTATGGCCTGAATGTATGGGATCGACTGCGGGCATTGCTAAATGTCATAAAAATGCTTATGGAGCAGAATTCTGCTACTGGAAGTAGTAAAATTCACCGAGCCTAA 1881 0.4211 MILSVPFLFFVNFTELSLNLQTKLKIIIEMVFWWPLLVLAFAYAICRFLLMLIPPNVPSIEVDASDVLEDENQTKENSFIYIPPRGRGQQSDKKVQCYEPATMKYLGYYPALTAEEVKERVAQARKAQKIWSKSSFKQRRQFLRILLKYIIKHQSLICEVSSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRAMLHKRSRVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNSIVIKVSEHASWSGCFYFQIIQSALTAVGAPENVVDVITGFAETGEALVSSVDKMIFVGSPGVGKMIMRNAADSLIPVTLELGGKDAFIVCEDVDVEHVAQIAARGVLQSSGQNCAGAERFYVHREIYSSFVAQVIKIVKSITAGPPLAGKYDMGAICLHELSEKLESLVVDATDKGAEIVARGSLGHISEGAVDQFYPPTVLVNVNHTMRLMQEEAFGPIMPIMKFNTDEEAIKLANDSKYGLGCAVFSGSQQRARNIASQIHCGVAAVNDFASTYMCQSLPFGGVKHSGFGRFAGVEGLRACCLVKSVVEDRWWPLIKTKIPKPIQYPVAENGFEFQESLVEVLYGLNVWDRLRALLNVIKMLMEQNSATGSSKIHRA* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00011 626 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 88 556 - -
Pte2g00011 626 Pfam Aldehyde dehydrogenase family 91 556 IPR015590 GO:0016491
Pte2g00011 626 FunFam Aldehyde dehydrogenase A 330 524 - -
Pte2g00011 626 SUPERFAMILY ALDH-like 84 558 IPR016161 GO:0016491
Pte2g00011 626 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 354 365 IPR016160 GO:0016491
Pte2g00011 626 CDD ALDH_F15-22 98 560 - -
Pte2g00011 626 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 94 554 IPR016162 GO:0016491
Pte2g00011 626 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 326 333 IPR029510 GO:0016491
Pte2g00011 626 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 334 529 IPR016163 GO:0016620
Pte2g00011 626 FunFam aldehyde dehydrogenase 22A1 94 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00011 Pte-Chr2 80690 87488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00011 30 622 Aldehyde Dehydrogenase Gene Family AT3G66658 81.450 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00011 - - qsa:O6P43_003671 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00011 2 80690 87488 Pte2g00011 2 80690 87488 RCT