Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00007 ATGGCAGAAAATGGAGGGTCTCTTTATGAACTCATTAGTTTCGATGGGGTTGAGGACAATCTCTCCAAAGATATTGATTTTGGGACTACCACTGCAAGAGTGTTTGAATCCCGGCACGCATATCTTTCCGATGTACATAGTTGGGAAGAAGACTCTTTGGGCATTGCATCTCTTTTCTTAGAGTTCGATGACACACAATTTCATGGAGTGGCTGGTCCATCAGAACCATATTCTGAACCATTTGAGTTTACTAAACTGTTAAACGACACAGACAATGATGATCCTCAATGTTATAATGAGCAACAATCTGCACCTTTAGCCTCAGTTGAGCTGCTGGAGAACCATATAAGTGAGTTTCAAAGATCGATGGAAGAAACTAGAGCTAAGCCAATGGAAGAGCCCACAAGCATAGGCGAAGGCAAACAGCTTTCAACTGAACAAATAATGAGGATAGCGGGAGCAAGGTTTGTCCAATCCTCTTCACCAACATCTAGTGATCCTCAAATTGGTAAATACCCTTTCGGAATTTCTTTCTTTGAGTCTGAACTGCCTAATGAAGTTCTCAAAGATGTGGAGCTCGCAGAAACTCTTTTTCTTTCAGCTGAAAAAGTTCAAAACGAACAGTATGATGCTGCGGCAAAACTACTTGATCAGTGTGATTCTTTTTCGTCTGATACTGGAAATCCTGTTCAAAGGCTTGCCTACTATTTCTCTGAAGCTCTATGGGAAAGAATTGACAGAAAAACCGGAAAGACTACAACAAAAGGCTTGGCTAAAAAACAGACAAGAAACCTTGATGAGGCAATGATGAATTCTCCCACTCTCCTGGCAGTTCATGAAAGGCTGCCTTTCTCTCAAATTCTACAATGTGCTGGGATGCAAGCCATCATAGAAAGCATGGCCAATGCTAACAAGGTTCATGTGATCGATCTTGGAATCAAGACTGGTTTGCACTGGACAATATTAATGCAAGCTCTTGCTTCTAGGGAAGAGTGCCCTCTTAAGCTTTTGAAAATAACAGCTGTCGGAACGTGTTCGATGCATTTGATTGAAGAAACAGGCAAGAGATTGATGAGTTTTGCTGCTTCCTTAAACATACCCTTTGCTTTTAGGGTGGTCATGGTGACAGACATGTTAAACCTCAAGGAATCTTTTTTCGATAAAGCTTTGGATGAGAAAGTTGCTGTCTACGCACCATTTTCATTAAGGAGCCTGCTTCATTTTCCTGATAGACTTGATGCAATTATGAAAGTTGTAAGAAACATGAATCCAAGAGTGATGGTTGTTGCAGAAGTTGAGGCCAATCACAATTCAAAGTCATTTGTGAGCCGTTTCACGGAGGCACTTTTCTACTTCAGCGCATTCTTCGATTGCCTTGAAACCTTCATGGCAAGGAATGACCCTCACAGAATGGTTTTAGAATCAGTGTACTTCAGTCAAGGCATAAGGAACATCGTGGCAGCTGAAGGAGAGGAAAGAAACATTAGACACGTAAACATTGATGTGTGGAGGAAATTTTTTGCTCGGTTTGGAATGATGGAGATGGAATTCAGCACTTCATCCTTACATCAAATAAATATATTAGCTGACAAATTTGATTGCGGCAGTTATGTTACTATTGACAGAAATGAGAGTTGCTTAATCATAGGTTGGAAGGGCACTCCACTTAACTCACTTTCAGTTTGGGAATTCGTACTTTGA 1701 0.4086 MAENGGSLYELISFDGVEDNLSKDIDFGTTTARVFESRHAYLSDVHSWEEDSLGIASLFLEFDDTQFHGVAGPSEPYSEPFEFTKLLNDTDNDDPQCYNEQQSAPLASVELLENHISEFQRSMEETRAKPMEEPTSIGEGKQLSTEQIMRIAGARFVQSSSPTSSDPQIGKYPFGISFFESELPNEVLKDVELAETLFLSAEKVQNEQYDAAAKLLDQCDSFSSDTGNPVQRLAYYFSEALWERIDRKTGKTTTKGLAKKQTRNLDEAMMNSPTLLAVHERLPFSQILQCAGMQAIIESMANANKVHVIDLGIKTGLHWTILMQALASREECPLKLLKITAVGTCSMHLIEETGKRLMSFAASLNIPFAFRVVMVTDMLNLKESFFDKALDEKVAVYAPFSLRSLLHFPDRLDAIMKVVRNMNPRVMVVAEVEANHNSKSFVSRFTEALFYFSAFFDCLETFMARNDPHRMVLESVYFSQGIRNIVAAEGEERNIRHVNIDVWRKFFARFGMMEMEFSTSSLHQINILADKFDCGSYVTIDRNESCLIIGWKGTPLNSLSVWEFVL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00007 566 Coils Coil 109 129 - -
Pte2g00007 566 ProSiteProfiles GRAS family profile. 184 563 IPR005202 -
Pte2g00007 566 Pfam GRAS domain family 195 563 IPR005202 -
Pte2g00007 566 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00007 Pte-Chr2 60818 62762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00007 191 564 GRAS Transcription Factor Family AT1G66350 31.565 5.53e-57 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte2g00007 GRAS 7.7e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00007 - - qsa:O6P43_021850 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00007 2 60818 62762 Pte2g00007 2 60818 62762 RCT