Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02822 ATGAACACCACACGAGAGAGAAGAGATCATTACCCATTTCCTCAAGACTCCGATATTGGAACATCATTGTCAAATCTCATATTAGCGGGAGGGGCAAACACCTTGGATGCTATTTTTTCCCGTTGGCCAACAACAAACAGGACAGCTACAGTGACAAACCCCATTTCTAAGCCTACGGGTTATTCTGTCTACCTTCGCCAGAGAGATCTTCTACACAAGTTCTGCCAAGAAAGCCGCGAAAACGGTTCCTTTCTTAGCAGTTCTCCGGGAAACCAGCTTGAGGACTACGTCTGCACAAGCACGAGGGCTAGGTCGAGCGCCAGCACAAACTCTTCCCTGGTGCCCACCAAGAAAAAACTGTACAGGGGTGTGAGACAGAGACATTGGGGGAAATGGGTAGCCGAGATCAGACTTCCTCAGAACAGAATAAGAGTCTGGTTAGGCACTTACGAGACCGCTGAAGCTGCTGCTTATGCTTATGATCGTGCTGCTTACAAGCTCCGAGGAGAGTACGCACGTTTAAATTTTCCAAATCTAGAGGACCCCAGCAAGCTGGGATTTGGAGATTCCACGAGATGGAATGCTTTGAAGAATTCTGTGGAGACTAAAATCCAAGCTGTGTGCCTGAAGGTGAAAAGAGAAAAAGCTAAAAGGAATGCCACCAAAAACTTCCATTCTGATGCTGAAGCTGCAGGTGAGAGATGTGATAAGATTCATTCTTCTTCATCCTCCTCGCTTCTGTCTCCATTTGTTTTGGAAGATGATTGGACCTGCAACTTGCTATCACCCACTTTTTCAGAGGACAGCATTTTGAAAGCTGGCCCTTCGTCACCTTCCTTTTCCACTGGAAATGGGCTGATGCTAAATGAGGGATCAGAATTCGAAGGATGTTCACTAGCAAAGATGCCATCCTTCGATCCCGAACTGATATGGGAAGTTCTTGCCAATTAG 951 0.4658 MNTTRERRDHYPFPQDSDIGTSLSNLILAGGANTLDAIFSRWPTTNRTATVTNPISKPTGYSVYLRQRDLLHKFCQESRENGSFLSSSPGNQLEDYVCTSTRARSSASTNSSLVPTKKKLYRGVRQRHWGKWVAEIRLPQNRIRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLEDPSKLGFGDSTRWNALKNSVETKIQAVCLKVKREKAKRNATKNFHSDAEAAGERCDKIHSSSSSSLLSPFVLEDDWTCNLLSPTFSEDSILKAGPSSPSFSTGNGLMLNEGSEFEGCSLAKMPSFDPELIWEVLAN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02822 316 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 54 314 - -
Pte1g02822 316 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Pte1g02822 316 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Pte1g02822 316 CDD AP2 119 179 IPR001471 GO:0003700|GO:0006355
Pte1g02822 316 Gene3D AP2/ERF domain 120 178 IPR036955 GO:0003700|GO:0006355
Pte1g02822 316 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Pte1g02822 316 SUPERFAMILY DNA-binding domain 120 177 IPR016177 GO:0003677
Pte1g02822 316 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Pte1g02822 316 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Pte1g02822 316 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02822 Pte-Chr1 47990479 47991711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02822 14 317 AP2-EREBP Transcription Factor Family AT1G64380 47.181 5.34e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g02822 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02822 - - qsa:O6P43_024033 343.584