Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02821 ATGCAGCAAGAGAAATTAATGGAGGCAACCTATTGGAGGTGGGAATGGGAGAAGAAACCACTCATGAATGAACTTGTGCAGGGAATAGAGCTCGCTAGAAGGTTAAAAGCAGAGCTGACGAATTCTTCTTATTCCAGAGAAACTGCGGATTCCTTGGTTCAGAAGATGCTATTTTCTTTTGAGAAGTCTCTACTGTTTCTGAAAGGCAGTAGGTCGGTTGAGCAGGTTGAGAGGTCAGGTGCATCTGTGGGTTTGCTACCCGAGTCTCCAGTCTCTGTTAACGGTAGTCCTGAGACTGAGGACTTGGATGTGAGTCGCAAGGATTATTATCATCAGGAGCATCGTGACGGATCGAAAAAGAGAAAGTCTTTGCCCAGATGGATAGAGCAAGTTAGAATGTCCTCAGAGAGTGGGCTGGAGGGGCCTCATGATGATGGTTACAGCTGGAGAAAATATGGGCAAAAAGATATCCTGGGAGCCAAATATCCAAGGAGTTACTATAGATGCACCTTTCGCAATACAAAGAACTGCTGGGCAACAAAGCAGGTGCAAAGATCTGATGAAGACCCCACTCTTTTCGAGGTCACCTATAGAGGAAGGCATGATTGCTTGTACGGAAATAATGCCGTGCAAACACCAGCATCTCCCGAAAAAAAACAAAGGAAAGAATACAATCATAGCATCGCCGATACTCACCACCATGGACAGTCATCACGGCAAATGCTCACAAGCCTGCACGACAGTTTATCATCATTTAACACTGAGAACTTGGAAGCTGACGAAATGGCTATTTATCCATTTACTTTCCCTTCAACTTCATTCGGATGCATGACAACCGAAATGCCGAGCTCGTTACCTTTCACAACTGAGCACAATACCCCCCTATACACATCTGATTCGAACTATTTCACAGTTTTACCTTCCCATATAACCAACTTTGGTCCAATTAATAGCCTGCACCTGCAATGTTCAGGATCTGACCTTACGGAGATAATATCAGCGAACACATCAGCCACTAACTCTCCAATCCCAGACTTGGATTTCATACTCGATCCAGTACAAATTGATGTGAGTTTCCCCTTTGACAGCCCGGAGCTTTTCTCTTAA 1107 0.4463 MQQEKLMEATYWRWEWEKKPLMNELVQGIELARRLKAELTNSSYSRETADSLVQKMLFSFEKSLLFLKGSRSVEQVERSGASVGLLPESPVSVNGSPETEDLDVSRKDYYHQEHRDGSKKRKSLPRWIEQVRMSSESGLEGPHDDGYSWRKYGQKDILGAKYPRSYYRCTFRNTKNCWATKQVQRSDEDPTLFEVTYRGRHDCLYGNNAVQTPASPEKKQRKEYNHSIADTHHHGQSSRQMLTSLHDSLSSFNTENLEADEMAIYPFTFPSTSFGCMTTEMPSSLPFTTEHNTPLYTSDSNYFTVLPSHITNFGPINSLHLQCSGSDLTEIISANTSATNSPIPDLDFILDPVQIDVSFPFDSPELFS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02821 368 SUPERFAMILY WRKY DNA-binding domain 142 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02821 368 SMART WRKY_cls 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02821 368 FunFam WRKY transcription factor 53 129 206 - -
Pte1g02821 368 ProSiteProfiles WRKY domain profile. 138 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02821 368 Gene3D WRKY domain 128 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02821 368 Pfam WRKY DNA -binding domain 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02821 368 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 274 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02821 Pte-Chr1 47979767 47984494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02821 16 360 WRKY Transcription Factor Family AT4G11070 41.477 4.28e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g02821 WRKY 2.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02821 - - qsa:O6P43_024024 369.007