Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02812 GTCGAGAATGCATATGTCCCTACTAAGAGATTGCAGTCACCTATTGAGACCCCATATGTTCCTCATAAGCCCCCAGGTGTTAAAGCTTTGTCTGATAAAACAATTGAAATATTTGAAGGCATGACCATTGCTGAGCTTGCAAAGCGTACTGGTCAATCAATACCATATATGAAGCAAATTCTTGTCAATGTCGGGGAGAAAATTAACTCAGAGTTTGAGACCCTCAGTATTGATGTTGCCGAGCTCATTTCGATGGAAGTTGGTGTAAATGTCAAGAGGGTCCATTCCAATGAAGGTGTGGATATTCAACCACGACCAGCAGTTGTGACAGTCATGGGCCATGTAGATCATGGAAAAACTTCTCTTCTGGATGCTTTACGTCAAACCTCAGTGGCAGCCAGAGAGGCTGGTGGCATAACTCAGCATCTTGGAGCCTTTGTTGTGCGCATGCCGTCTGGAGCATCTATCACATTTCTCGACACCCCTGGCCATGCTGCATTTAGTGCAATGCGAGCAAGAGGGGCAGCTGTCACAGACATAGTAGTCCTAGTGGTTGCTGCTGATGATGGTGTGATGCCTCAAACACTTGAAGCCATGTTGCATGCTAAAGCAGCTAATGTTCCAATCGTTGTTGCCATAAATAAATGCGATAAACCTGGTGCAAATCCTGAAAGAGTAAAGTTGCAGCTTGCTACTGAGGGCTTGATGCTGGAAGAGATGGGTGGGGATGTTCAGGTTGTTGAGGTTTCAGCAAAACAAAAAATTGGACTAGTCAAGTTAGAGGAGGCTTTACTCCTTCAGGCTGAAATGATGGATCTGAAAGCACGTATTGATGGCCCTGCTCAAGCTTATGTGGTGGAGGCAAGACTTGACAGGGGGCGTGGTCCACTGGCAACTGCAATAGTTAAGGCAGGGACTTTAGTTTGTGGTCAGCATATTGTTGTGGGCTCGGAGTGGGGCAGAATAAGGGCTATTAGAGATATGATAGGCGAATCCACTAATCAGGCTAGTCCAGCAATGCCTATTGAGATTGAAGGTTTAAAGGGACTTCCTATGGCTGGTGATGATATTATTGTTGTGGATTCTGAGGATCGAGCTCGAATGCTTAGTGCAGGTAGGGAAAAGAAACATGAGAAGGACAGGCTTAATAAATCGTACCAAGATTTGCTGGATTCCATGCCACAGGAGAAGGAAGGGGGAAAGGATGATAGCGAAGATGTGGAAAAGAATGAGAATAGGAAGCCCACTAGGGTTGAAATGCCTATCATAGTGAAAGGGGATGTTCAAGGTACTGTCCAAGCTGTTGCAGATGCATTGAGAACTTTAGATAGTCCTCAGTTGTTCGTAAATATAGTTCATGTTGGTGTGGGGCCTATCGCGCAATCTGATGTAGACTTGGCGCAAGCTTGTGGAGCTTGCATAGTAGGGTTTAATGTGAAGAGTCCTCCTTCTTCTATCAGTCAGGCAGCAATACGAGCTCAGATAAAGATAAAGCTGCACCGAGTGATTTACCATCTTTTGGAGGACATCGGAAATCTGATAGTGGAGAAGGCCCCTGGAACTGCTGAGACCCAAGTTGTTGGCCAGGCCGAGGTGTTGAGCATCTTTGAGCTGAAAGGAAGAAGCAAAGCCAAAGGTGATGATGTGAAAATAGCTGGTTGTCGGGTGCTCGATGGGTGTGTCAACAAATCAGCAACCGTGAGGCTGATGAGGAGTGGGGAATTTGTTTTCAAAGGGCTGTGTGAATCACTGAAGCGTGAGAAGCAGGATGTGGAAACAGTGAGGAAGGGAAATGAGTGTGGACTTGTAATCCGGGACTGGCATGATTTCAAAGTTGGAGATGTTGTCCAGTGCTTGGAGCAGGTCGTGAGGAAGCCGAAGTTCATCAAGTCAGAGAGTGGTGCTGTTAGAATAGACTGC 1920 0.462 VENAYVPTKRLQSPIETPYVPHKPPGVKALSDKTIEIFEGMTIAELAKRTGQSIPYMKQILVNVGEKINSEFETLSIDVAELISMEVGVNVKRVHSNEGVDIQPRPAVVTVMGHVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVRMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMLHAKAANVPIVVAINKCDKPGANPERVKLQLATEGLMLEEMGGDVQVVEVSAKQKIGLVKLEEALLLQAEMMDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHIVVGSEWGRIRAIRDMIGESTNQASPAMPIEIEGLKGLPMAGDDIIVVDSEDRARMLSAGREKKHEKDRLNKSYQDLLDSMPQEKEGGKDDSEDVEKNENRKPTRVEMPIIVKGDVQGTVQAVADALRTLDSPQLFVNIVHVGVGPIAQSDVDLAQACGACIVGFNVKSPPSSISQAAIRAQIKIKLHRVIYHLLEDIGNLIVEKAPGTAETQVVGQAEVLSIFELKGRSKAKGDDVKIAGCRVLDGCVNKSATVRLMRSGEFVFKGLCESLKREKQDVETVRKGNECGLVIRDWHDFKVGDVVQCLEQVVRKPKFIKSESGAVRIDC 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02812 640 Pfam Elongation factor Tu GTP binding domain 109 265 IPR000795 GO:0003924|GO:0005525
Pte1g02812 640 MobiDBLite consensus disorder prediction 387 415 - -
Pte1g02812 640 Gene3D - 416 520 IPR036925 -
Pte1g02812 640 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 415 528 IPR036925 -
Pte1g02812 640 Gene3D Translation factors 522 625 - -
Pte1g02812 640 Gene3D Translation factors 277 392 - -
Pte1g02812 640 FunFam Translation initiation factor IF-2 523 627 - -
Pte1g02812 640 MobiDBLite consensus disorder prediction 394 415 - -
Pte1g02812 640 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 104 274 IPR000795 GO:0003924|GO:0005525
Pte1g02812 640 FunFam Translation initiation factor IF-2 101 276 - -
Pte1g02812 640 Gene3D - 101 276 IPR027417 -
Pte1g02812 640 CDD IF2_eIF5B 108 271 - -
Pte1g02812 640 Hamap Translation initiation factor IF-2 [infB]. 2 626 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte1g02812 640 FunFam Translation initiation factor IF-2 416 522 - -
Pte1g02812 640 NCBIfam translation initiation factor IF-2 32 623 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte1g02812 640 CDD mtIF2_IVc 528 618 - -
Pte1g02812 640 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 31 634 IPR015760 -
Pte1g02812 640 Pfam Translation-initiation factor 2 399 510 IPR023115 -
Pte1g02812 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 273 IPR027417 -
Pte1g02812 640 CDD IF2_mtIF2_II 280 375 IPR044145 -
Pte1g02812 640 NCBIfam small GTP-binding protein domain 107 257 IPR005225 GO:0005525
Pte1g02812 640 SUPERFAMILY Translation proteins 523 625 IPR009000 -
Pte1g02812 640 SUPERFAMILY Translation proteins 278 361 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02812 Pte-Chr1 47907019 47909584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02812 105 508 Eukaryotic Initiation Factors Gene Family AT1G21160 26.522 6.68e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02812 K02519 - zju:107430122 969.918