Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g02812 | GTCGAGAATGCATATGTCCCTACTAAGAGATTGCAGTCACCTATTGAGACCCCATATGTTCCTCATAAGCCCCCAGGTGTTAAAGCTTTGTCTGATAAAACAATTGAAATATTTGAAGGCATGACCATTGCTGAGCTTGCAAAGCGTACTGGTCAATCAATACCATATATGAAGCAAATTCTTGTCAATGTCGGGGAGAAAATTAACTCAGAGTTTGAGACCCTCAGTATTGATGTTGCCGAGCTCATTTCGATGGAAGTTGGTGTAAATGTCAAGAGGGTCCATTCCAATGAAGGTGTGGATATTCAACCACGACCAGCAGTTGTGACAGTCATGGGCCATGTAGATCATGGAAAAACTTCTCTTCTGGATGCTTTACGTCAAACCTCAGTGGCAGCCAGAGAGGCTGGTGGCATAACTCAGCATCTTGGAGCCTTTGTTGTGCGCATGCCGTCTGGAGCATCTATCACATTTCTCGACACCCCTGGCCATGCTGCATTTAGTGCAATGCGAGCAAGAGGGGCAGCTGTCACAGACATAGTAGTCCTAGTGGTTGCTGCTGATGATGGTGTGATGCCTCAAACACTTGAAGCCATGTTGCATGCTAAAGCAGCTAATGTTCCAATCGTTGTTGCCATAAATAAATGCGATAAACCTGGTGCAAATCCTGAAAGAGTAAAGTTGCAGCTTGCTACTGAGGGCTTGATGCTGGAAGAGATGGGTGGGGATGTTCAGGTTGTTGAGGTTTCAGCAAAACAAAAAATTGGACTAGTCAAGTTAGAGGAGGCTTTACTCCTTCAGGCTGAAATGATGGATCTGAAAGCACGTATTGATGGCCCTGCTCAAGCTTATGTGGTGGAGGCAAGACTTGACAGGGGGCGTGGTCCACTGGCAACTGCAATAGTTAAGGCAGGGACTTTAGTTTGTGGTCAGCATATTGTTGTGGGCTCGGAGTGGGGCAGAATAAGGGCTATTAGAGATATGATAGGCGAATCCACTAATCAGGCTAGTCCAGCAATGCCTATTGAGATTGAAGGTTTAAAGGGACTTCCTATGGCTGGTGATGATATTATTGTTGTGGATTCTGAGGATCGAGCTCGAATGCTTAGTGCAGGTAGGGAAAAGAAACATGAGAAGGACAGGCTTAATAAATCGTACCAAGATTTGCTGGATTCCATGCCACAGGAGAAGGAAGGGGGAAAGGATGATAGCGAAGATGTGGAAAAGAATGAGAATAGGAAGCCCACTAGGGTTGAAATGCCTATCATAGTGAAAGGGGATGTTCAAGGTACTGTCCAAGCTGTTGCAGATGCATTGAGAACTTTAGATAGTCCTCAGTTGTTCGTAAATATAGTTCATGTTGGTGTGGGGCCTATCGCGCAATCTGATGTAGACTTGGCGCAAGCTTGTGGAGCTTGCATAGTAGGGTTTAATGTGAAGAGTCCTCCTTCTTCTATCAGTCAGGCAGCAATACGAGCTCAGATAAAGATAAAGCTGCACCGAGTGATTTACCATCTTTTGGAGGACATCGGAAATCTGATAGTGGAGAAGGCCCCTGGAACTGCTGAGACCCAAGTTGTTGGCCAGGCCGAGGTGTTGAGCATCTTTGAGCTGAAAGGAAGAAGCAAAGCCAAAGGTGATGATGTGAAAATAGCTGGTTGTCGGGTGCTCGATGGGTGTGTCAACAAATCAGCAACCGTGAGGCTGATGAGGAGTGGGGAATTTGTTTTCAAAGGGCTGTGTGAATCACTGAAGCGTGAGAAGCAGGATGTGGAAACAGTGAGGAAGGGAAATGAGTGTGGACTTGTAATCCGGGACTGGCATGATTTCAAAGTTGGAGATGTTGTCCAGTGCTTGGAGCAGGTCGTGAGGAAGCCGAAGTTCATCAAGTCAGAGAGTGGTGCTGTTAGAATAGACTGC | 1920 | 0.462 | VENAYVPTKRLQSPIETPYVPHKPPGVKALSDKTIEIFEGMTIAELAKRTGQSIPYMKQILVNVGEKINSEFETLSIDVAELISMEVGVNVKRVHSNEGVDIQPRPAVVTVMGHVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVRMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMLHAKAANVPIVVAINKCDKPGANPERVKLQLATEGLMLEEMGGDVQVVEVSAKQKIGLVKLEEALLLQAEMMDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHIVVGSEWGRIRAIRDMIGESTNQASPAMPIEIEGLKGLPMAGDDIIVVDSEDRARMLSAGREKKHEKDRLNKSYQDLLDSMPQEKEGGKDDSEDVEKNENRKPTRVEMPIIVKGDVQGTVQAVADALRTLDSPQLFVNIVHVGVGPIAQSDVDLAQACGACIVGFNVKSPPSSISQAAIRAQIKIKLHRVIYHLLEDIGNLIVEKAPGTAETQVVGQAEVLSIFELKGRSKAKGDDVKIAGCRVLDGCVNKSATVRLMRSGEFVFKGLCESLKREKQDVETVRKGNECGLVIRDWHDFKVGDVVQCLEQVVRKPKFIKSESGAVRIDC | 640 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g02812 | 640 | Pfam | Elongation factor Tu GTP binding domain | 109 | 265 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g02812 | 640 | MobiDBLite | consensus disorder prediction | 387 | 415 | - | - | |
Pte1g02812 | 640 | Gene3D | - | 416 | 520 | IPR036925 | - | |
Pte1g02812 | 640 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 415 | 528 | IPR036925 | - | |
Pte1g02812 | 640 | Gene3D | Translation factors | 522 | 625 | - | - | |
Pte1g02812 | 640 | Gene3D | Translation factors | 277 | 392 | - | - | |
Pte1g02812 | 640 | FunFam | Translation initiation factor IF-2 | 523 | 627 | - | - | |
Pte1g02812 | 640 | MobiDBLite | consensus disorder prediction | 394 | 415 | - | - | |
Pte1g02812 | 640 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 104 | 274 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g02812 | 640 | FunFam | Translation initiation factor IF-2 | 101 | 276 | - | - | |
Pte1g02812 | 640 | Gene3D | - | 101 | 276 | IPR027417 | - | |
Pte1g02812 | 640 | CDD | IF2_eIF5B | 108 | 271 | - | - | |
Pte1g02812 | 640 | Hamap | Translation initiation factor IF-2 [infB]. | 2 | 626 | IPR000178 | GO:0003743|GO:0003924|GO:0005525|GO:0006413 | |
Pte1g02812 | 640 | FunFam | Translation initiation factor IF-2 | 416 | 522 | - | - | |
Pte1g02812 | 640 | NCBIfam | translation initiation factor IF-2 | 32 | 623 | IPR000178 | GO:0003743|GO:0003924|GO:0005525|GO:0006413 | |
Pte1g02812 | 640 | CDD | mtIF2_IVc | 528 | 618 | - | - | |
Pte1g02812 | 640 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 31 | 634 | IPR015760 | - | |
Pte1g02812 | 640 | Pfam | Translation-initiation factor 2 | 399 | 510 | IPR023115 | - | |
Pte1g02812 | 640 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 101 | 273 | IPR027417 | - | |
Pte1g02812 | 640 | CDD | IF2_mtIF2_II | 280 | 375 | IPR044145 | - | |
Pte1g02812 | 640 | NCBIfam | small GTP-binding protein domain | 107 | 257 | IPR005225 | GO:0005525 | |
Pte1g02812 | 640 | SUPERFAMILY | Translation proteins | 523 | 625 | IPR009000 | - | |
Pte1g02812 | 640 | SUPERFAMILY | Translation proteins | 278 | 361 | IPR009000 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g02812 | Pte-Chr1 | 47907019 | 47909584 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g02812 | 105 | 508 | Eukaryotic Initiation Factors Gene Family | AT1G21160 | 26.522 | 6.68e-23 | 102 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g02812 | K02519 | - | zju:107430122 | 969.918 |