Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02808 ATGGCTAGGCGTTGCCCTGATGGCGAGCCAGTGAAAAAATTATATGTATGTGCCACCTTGGCTGCAGTGTTGGCAGCTGGTTTTGCCACAGATTATATTGGCATCCATGCCCTCTTTGGAGCATTTGTTGTTGGAGTTTTAATCCCAAAAGAAGGACAATTTGCTGGAGCTCTGGTAGAGAAGGTTGAGGATCTCGTTTCTGGTCTTTTCCTTCCATTGTACTTCGTCTCAAGTGGACTGAAGACAAATGTAGCAACGATACATGGGCTGCAGTCATGGATTCTTCTAATTTTGGTTTTAAATGATCAAACATTCACAATCATGGTGCTGATGGCTATCTTTACAACTTTCATCACAACACCACTAGTCACAGCAATATACAGACCAACTAAAAGAAAAGGCGAAGCTGATTATGAATATAGAACTATTGAAAGGGAAGATCTTAGTACTCCGCTCTGA 459 0.4183 MARRCPDGEPVKKLYVCATLAAVLAAGFATDYIGIHALFGAFVVGVLIPKEGQFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIHGLQSWILLILVLNDQTFTIMVLMAIFTTFITTPLVTAIYRPTKRKGEADYEYRTIEREDLSTPL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02808 152 Pfam Sodium/hydrogen exchanger family 11 99 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte1g02808 152 Gene3D - 1 101 IPR038770 -
Pte1g02808 152 PANTHER CATION/H + ANTIPORTER 100 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02808 Pte-Chr1 47895459 47896251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02808 1 152 Antiporter Super Family AT5G41610 54.146 1.22e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02808 K26731 - tcc:18606628 211.46