Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02805 ATGGACAAGACTTTAGTTCATCACCAGAACAAGATGATTAGAGAACTTGAAAGACTGAGCAAACTCTGTCATGATAATCTAGTCCGACCCTTGGGCTATGTTATCTATGAAGACGTTGCTCTTCTGCTGCAGCATCACTTACCTAATGGAACATTAGCTCAGCTTCTTCACGAATCAACAAAGGAACCTGAATATCGACCTGACTGGCCAATAAGACTTTCAATTGCTATTGGAGTGGCAGAAGGGTTGGCTTTCCTTCATCATTTGGCAGTTATCCATCTTGACATTTCCTCTGGTAATGTGCTCTTGGATGGAGACTTCAAGCCTTTGGTTGGAGAAATTGAGATTTCAAAACTTATTGATCCAACCAAAGGTACTGCCAGTATAAGTCAAGTTGCAGGCTCTTTTGGCTATATCCCACCAGAGTATGCGTATACAATGCAAGTTACAGCACCAGGAAATGTATACAGCTATGGTGTTATTCTGCTTGAGATCCTTACAACTCGACTGCCAGTTGATGAAGCTTTTGGTGAAGGCGTGGATTTGGTGAAGTGGGTTCACAGTGCTCCTATTAGAAGTGAAACTCCTGAACAGTCCTTTGATGTCCCGTCAAACTACTACTATTGA 627 0.4226 MDKTLVHHQNKMIRELERLSKLCHDNLVRPLGYVIYEDVALLLQHHLPNGTLAQLLHESTKEPEYRPDWPIRLSIAIGVAEGLAFLHHLAVIHLDISSGNVLLDGDFKPLVGEIEISKLIDPTKGTASISQVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEAFGEGVDLVKWVHSAPIRSETPEQSFDVPSNYYY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02805 208 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 188 - -
Pte1g02805 208 Pfam Protein tyrosine and serine/threonine kinase 7 172 IPR001245 GO:0004672|GO:0006468
Pte1g02805 208 ProSitePatterns Tyrosine protein kinases specific active-site signature. 91 103 IPR008266 GO:0004672|GO:0006468
Pte1g02805 208 Gene3D Transferase(Phosphotransferase) domain 1 2 206 - -
Pte1g02805 208 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02805 208 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 47 205 - -
Pte1g02805 208 SUPERFAMILY Protein kinase-like (PK-like) 7 186 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02805 Pte-Chr1 47867786 47868507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02805 1 201 Receptor kinase-like Gene Family AT2G41820 78.607 1.33e-114 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte1g02805 PK_Tyr_Ser-Thr 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02805 - - qsa:O6P43_006509 373.244