Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02804 ATGGAGCAGAAAAGTATTCTGTTATCAGCCTTAGGCGTGGGTGTTGGGGTAGGAGTGGGAATTGGATTGGCTTCTGGACAAAGCGTTAGCAAATGGGCTGGCAATACTACTTCAAACGCTATTACTGCTGAAAGGATTGAGCAAGAAATGCTCAAACAAATTGTTGATGGAAGAGAAAGCAACGTCACCTTTAATCAGTTTCCATATTACCTCAGTGAACAAACGCGGGCACTACTAACAAGTGCTGCTTACGTGCATTTGAAGCATGCTGAAGCTTCCAAATACACACGGAATCTTTCTCCTGCTAGTAGGGCTATTTTGCTCTCAGGTCCTGCAGAACTGTACCAACAAATGCTTGCTAAGGCTTTGGCTCATTACTTTGAGGCAAAATTGCTGCTTTTGGATGTGACAGACTTCTCGTTGAAAATACAGAGCAAATACGGTACTACTAATAACAGAGAATCATCTTTTAAAAGATCTCCTTCAGATTCCACCTTGGAGCGATTATCTAGCTTATTGGGATCATTTTCAATTTTTCCACCGAAGGAAGAACCTAAAGGCACCATACAGAGGATAAATAGTGGGGATCTAGGATCGTGCATGGCCAGTGGCTCTTATAATCCTCCCAAGCTTCGTAGAAACGCATCTGCGTCTGCAAATATCAACAACATTCCTTCGCAAAACACTCAAGCCAACCCTGCTCCTCAGCGCACAAGCAGCTGGTGCTTTGATGAAAAGCTTCTAATACAATCCTTGTACAAGGTCCTGGTTTCTGTGTCAAAAACCTACCCAATTGTGCTTTATCTGCGAGATGTCGACAAGGTGTTACTGAAATCTCCAAGAGTATACAACTTGTTCCAGAAAATGTTGAAGAAACTATCTGGAACAGTGTTAATTCTTGGTTCTCGAATTCTGGCCCCTGATAATGACTATGGAGAAGTGGATGAAAGGCTCAGTGCTATTTTCCCTTATAATATAGAAATCATGCCTCCCGAAGATGAATCTCATCTTGTGAGCTGGAAATCTCAACTAGAAGAGGATATGAAAACGATCCAGGTTCAGGATAACAGAAATCATATCGTGGAAGTACTTACTGCCAATGATCTTGACTGCGATGATCTCGATTCCATTTGTGTGGCTGACACTATGGTTCTCAGTAATTACATAGAAGAGATCATCGTATCAGCTATTTCATATCATTTAATGAATAACAACAACCCAGACTACCGAAATGGGAGGCTTATAATACCATCCAACAGTTTGTCCCATGGATTGAGTATATTCCAGGAAGGGAAATCTATTGGCAAGGACACACTAAAACTAGATGCAAAATCTGAGGCAGCGGAGAAAGGAAGGGGTGAACAAACTCCTGTTATCAATCTTGAGCCAAAAACTGAGTCGGCACCTGCTGCCAGAAATAAAAATGAAGCAGATGGTGAAACAGCAGCTCCTCCATCAAAAGCTGCTGAAGTCCCTGACAATGAATTTGAGAAGAGAATAAGGCCAGAGGTCATACCAGCAAGTGAGATAGATGTATCATTTGCTGATATTGGTGCCCTGGAAGACACCAAGGAATCCCTTCAGGAGCTGGTGATGCTTCCTCTTCGAAGACCAGACCTCTTCTCTGGAGGTCTTCTCAAGCCTTGCAGAGGAATATTACTCTTTGGGCCGCCTGGAACGGGCAAGACTATGCTAGCCAAGGCCATAGCAAAGGAGGCTGGGGCAAGTTTTATAAATGTGTCCATGTCTACGATCACTTCCAAATGGTTTGGTGAAGATGAGAAGAATGTGCGAGCTTTGTTCACATTGGCTACCAAGGTCTCCCCTACTATTATCTTTGTGGATGAGGTCGATAGTATGCTCGGGCAGCGAACAAGAGTTGGAGAACATGAAGCCATGCGGAAGATTAAGAATGAGTTTATGACACACTGGGACGGTCTTATGACAAAACAGGGAGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTGGATGAAGCAATTATTAGGAGATTTGAGAGGAGGATAATGGTTGGATTGCCCTGTCCTGAAAATAGAGAAATGATTTTGAAAACTCTTATATCAAAAGAGAAAGTTGAAGAAAGACTCGATTTTAAGGAGCTGGCAACTATGACAGAAGGATACTCCGGAAGTGACCTTAAGAATTTGTGCACCACAGCTGCCTATCGACCAGTTAGGGATCTAATTCAGCAAGAAAGGCTTAAAGATATGGAGAAAAAACGAAAAGCTGGAGAAGCACGGAATTCTTCGGACGCGGCAGAACGACAGGACCAGTCTACTAGAAATGATTCACTGTGTGTAGAAGAGAAGGAGAAAGGGAAACAAGGAAGAGTTATCAACCTGAGACCATTAAATATGGAAGATTTTCGGCAGGCCAAGCAGCAGGTTGCAGCAAGTTTTGCAGCGCAGGGGTCGATAATGAGCGAGTTGAAGCAATGGAACGATCTGTACGGAGAAGGTGGTTCTAGGAAGCAAGAACAGTTATCTTACTTCCTGTGA 2529 0.433 MEQKSILLSALGVGVGVGVGIGLASGQSVSKWAGNTTSNAITAERIEQEMLKQIVDGRESNVTFNQFPYYLSEQTRALLTSAAYVHLKHAEASKYTRNLSPASRAILLSGPAELYQQMLAKALAHYFEAKLLLLDVTDFSLKIQSKYGTTNNRESSFKRSPSDSTLERLSSLLGSFSIFPPKEEPKGTIQRINSGDLGSCMASGSYNPPKLRRNASASANINNIPSQNTQANPAPQRTSSWCFDEKLLIQSLYKVLVSVSKTYPIVLYLRDVDKVLLKSPRVYNLFQKMLKKLSGTVLILGSRILAPDNDYGEVDERLSAIFPYNIEIMPPEDESHLVSWKSQLEEDMKTIQVQDNRNHIVEVLTANDLDCDDLDSICVADTMVLSNYIEEIIVSAISYHLMNNNNPDYRNGRLIIPSNSLSHGLSIFQEGKSIGKDTLKLDAKSEAAEKGRGEQTPVINLEPKTESAPAARNKNEADGETAAPPSKAAEVPDNEFEKRIRPEVIPASEIDVSFADIGALEDTKESLQELVMLPLRRPDLFSGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLATKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPCPENREMILKTLISKEKVEERLDFKELATMTEGYSGSDLKNLCTTAAYRPVRDLIQQERLKDMEKKRKAGEARNSSDAAERQDQSTRNDSLCVEEKEKGKQGRVINLRPLNMEDFRQAKQQVAASFAAQGSIMSELKQWNDLYGEGGSRKQEQLSYFL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02804 842 ProSitePatterns AAA-protein family signature. 655 674 IPR003960 GO:0005524|GO:0016887
Pte1g02804 842 Gene3D - 684 763 - -
Pte1g02804 842 Pfam ATPase family associated with various cellular activities (AAA) 552 682 IPR003959 GO:0005524|GO:0016887
Pte1g02804 842 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 511 685 - -
Pte1g02804 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 749 IPR027417 -
Pte1g02804 842 MobiDBLite consensus disorder prediction 446 494 - -
Pte1g02804 842 MobiDBLite consensus disorder prediction 746 781 - -
Pte1g02804 842 SMART AAA_5 548 685 IPR003593 GO:0016887
Pte1g02804 842 Pfam AAA+ lid domain 706 749 IPR041569 -
Pte1g02804 842 Gene3D - 511 683 IPR027417 -
Pte1g02804 842 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02804 Pte-Chr1 47857494 47863014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02804 512 744 Calmodulin-binding Proteins AT3G56690 37.288 2.73e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02804 - - qsa:O6P43_024119 1275