Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02798 ATGGATGAGGGATCACTGGACGATATTATTCGGAGGCTAACTTCTGCAAAGAACGGGAGGACGACCAGACAGGTGCAACTTACTGAGGCAGAAATCCGTCAGTTATGTGTTTCTTCCAAGGAGATATTTCTTAGTCAACCTAATCTTCTTGAACTAGAAGCTCCCATAAAGATTTGTGGAGATGTTCATGGTCAGTTTTCAGATCTTCTACGGTTGTTTGAGTATGGTGGTTTTCCACCCGAAGCCAATTATTTATTCCTAGGAGACTATGTTGATCGTGGTAAGCAGAGCATAGAGACCATATGCCTTCTCCTTGCCTACAAGATCAAATACAAAGAGAACTTTTTTCTTCTCAGGGGAAACCATGAATGTGCTTCCATCAACCGTATATATGGTTTTTATGATGAGTGCAAGAGGAGGTTCAATGTTCGTCTTTGGAAGACATTTACTGACTGCTTTAATTGTTTACCTGTTGCTGCTCTCATAGATGAGAAGATACTTTGCATGCATGGTGGATTATCTCCTGATCTGAAAAACTTGGATCAGATCAGAAAGATTGCACGTCCAGTTGATGTTCCAGATCAGGGTCTTCTCTGTGACCTGCTATGGGCTGATCCTGATAAAGATCTCGATGGGTGGGGGGAGAATGACCGAGGTGTATCATATACATTTGGGGCAGACAAGGTGGTTGAGTTTCTGGAGAAACATGACCTTGATCTGATTTGCCGCGCTCACCAGATGGATATGAGTTTTTTTGCGAAGCGGCAGCTAGTTACCATATTTTCAGCACCTAATTATTGTGGTGAGTTTGATAATGCTGGTGCCATGATGAGTGTGGATGACAGCTTGACATGCTCGTTTCAGATCCTTAAATCCACAGATAAGAAGGGGAAGGGAGGGTTTGGCAGCAACACATCACGACCCGGAACTCCTCCTCATAAGGGGAAGGGTTAG 954 0.4371 MDEGSLDDIIRRLTSAKNGRTTRQVQLTEAEIRQLCVSSKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRKIARPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSYTFGADKVVEFLEKHDLDLICRAHQMDMSFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSTDKKGKGGFGSNTSRPGTPPHKGKG* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02798 317 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 296 - -
Pte1g02798 317 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Pte1g02798 317 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Pte1g02798 317 Gene3D - 1 302 IPR029052 -
Pte1g02798 317 CDD MPP_PP1_PPKL 6 291 - -
Pte1g02798 317 FunFam Serine/threonine-protein phosphatase 1 300 - -
Pte1g02798 317 MobiDBLite consensus disorder prediction 295 317 - -
Pte1g02798 317 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Pte1g02798 317 SMART pp2a_7 27 294 IPR006186 GO:0016787
Pte1g02798 317 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Pte1g02798 317 SUPERFAMILY Metallo-dependent phosphatases 22 294 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02798 Pte-Chr1 47744310 47748393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02798 56 240 Calmodulin-binding Proteins AT5G63870 31.364 2.62e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02798 K06269 - gmx:100783178 610.912