Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g02795 | ATGGGAATTCGTAAACCCAAAAAAGGCAAGAAGAATCAGAACAAGAGTGTAGTGCAGCATGTAAAGGCAGACAGCTCTCGCTCAGATGCAAGGGCTTACCGTAACTATGGGCAGAAACCAATCAAACCTAGAAGCTACTACAGAAGCAGTAGCTGCTTGGCCAGGAAACGAGTAGAAAGGAGCAGTTTGGATCCAGCAGTTTTTATTGTAACCTACACTGCAGAACACAGCCACCCTCATCCAACTCGCACAAAATCAATGTCTGGTAGCACCCTGAAGAAAAAGGTTCTTTCAACTTCTGCCACACCTGATAGTACAGAGGAGAAAGGCACTCAGCCTCGATCCTCCCTCGAATGGTCCGGTCTCCAATTTCAGAAACTACACCCATTATTGAGGATGCGCTTGTAG | 408 | 0.4657 | MGIRKPKKGKKNQNKSVVQHVKADSSRSDARAYRNYGQKPIKPRSYYRSSSCLARKRVERSSLDPAVFIVTYTAEHSHPHPTRTKSMSGSTLKKKVLSTSATPDSTEEKGTQPRSSLEWSGLQFQKLHPLLRMRL* | 136 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g02795 | 135 | MobiDBLite | consensus disorder prediction | 83 | 120 | - | - | |
Pte1g02795 | 135 | ProSiteProfiles | WRKY domain profile. | 22 | 81 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02795 | 135 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Pte1g02795 | 135 | Gene3D | WRKY domain | 11 | 82 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02795 | 135 | SUPERFAMILY | WRKY DNA-binding domain | 25 | 81 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02795 | 135 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 6 | 112 | IPR044810 | GO:0003700 | |
Pte1g02795 | 135 | SMART | WRKY_cls | 27 | 80 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02795 | 135 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Pte1g02795 | 135 | Pfam | WRKY DNA -binding domain | 29 | 79 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02795 | 135 | MobiDBLite | consensus disorder prediction | 77 | 120 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g02795 | Pte-Chr1 | 47722414 | 47722961 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g02795 | 10 | 94 | WRKY Transcription Factor Family | AT5G52830 | 57.609 | 2.19e-28 | 104 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pte1g02795 | WRKY | 1.3e-11 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g02795 | K13426 | K13425 | gmx:102663255 | 119.398 |